RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 ACO2Q99798 780 aaKnown RBP6.32□□□□□ -1.4
RFC4-212ENST00000479307 LANCL2Q9NS86 450 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 TDP1Q9NUW8 608 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 GABBR1Q9UBS5 961 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 NCOA2Q15596 1464 aa6.32□□□□□ -1.4
RFC4-212ENST00000479307 GPATCH8Q9UKJ3 1502 aaKnown RBP6.31□□□□□ -1.4
RFC4-212ENST00000479307 SLC26A4O43511 780 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 B4GALT4O60513 344 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 ITGA10O75578 1167 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 YY1P25490 414 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 SREBF1P36956 1147 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 SLC6A9P48067 706 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 RAC3P60763 192 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 ADAM8P78325 824 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 IL10RAQ13651 578 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 NT5DC1Q5TFE4 455 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 PDZD4Q76G19 769 aaPredicted RBP6.31□□□□□ -1.4
RFC4-212ENST00000479307 SRGAP1Q7Z6B7 1085 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 LRRC56Q8IYG6 542 aaPredicted RBP6.31□□□□□ -1.4
RFC4-212ENST00000479307 CMTM4Q8IZR5 234 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 PQLC1Q8N2U9 271 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 NSUN6Q8TEA1 469 aaKnown RBP6.31□□□□□ -1.4
RFC4-212ENST00000479307 CASKIN2Q8WXE0 1202 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 TTC17Q96AE7 1141 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 SEC61A2Q9H9S3 476 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 PCDHA13Q9Y5I0 950 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 KIAA1107Q9UPP5 1409 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 MSH6P52701 1360 aa6.31□□□□□ -1.4
RFC4-212ENST00000479307 ERVK-7P63135 1459 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 DBX1A6NMT0 343 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 FAM227AF5H4B4 570 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 PLIN1O60240 522 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 CNOT4O95628 575 aaKnown RBP6.3□□□□□ -1.4
RFC4-212ENST00000479307 MYL1P05976 194 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 JAG1P78504 1218 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 PURAQ00577 322 aaKnown RBP6.3□□□□□ -1.4
RFC4-212ENST00000479307 DSC2Q02487 901 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 GRM3Q14832 879 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 RAB39AQ14964 217 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 ARHGEF18Q6ZSZ5 1173 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 CHST15Q7LFX5 561 aaPredicted RBP6.3□□□□□ -1.4
RFC4-212ENST00000479307 ZDHHC14Q8IZN3 488 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 LILRA3Q8N6C8 439 aaPredicted RBP6.3□□□□□ -1.4
RFC4-212ENST00000479307 CFHR4Q92496 578 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 RGMAQ96B86 450 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 CDC5LQ99459 802 aaKnown RBP6.3□□□□□ -1.4
RFC4-212ENST00000479307 MAN1C1Q9NR34 630 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 USP40Q9NVE5 1235 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 POLHQ9Y253 713 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 SIK3Q9Y2K2 1263 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 PCDHB1Q9Y5F3 818 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 ADAMTS20P59510 1910 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 MAST1Q9Y2H9 1570 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 TET3O43151 1660 aa6.3□□□□□ -1.4
RFC4-212ENST00000479307 FRMPD2Q68DX3 1309 aaPredicted RBP6.29□□□□□ -1.4
RFC4-212ENST00000479307 PLEKHH2Q8IVE3 1493 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 ARIH2O95376 493 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 IL2RBP14784 551 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 CFPP27918 469 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 GUCY1A2P33402 732 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 FXR1P51114 621 aaKnown RBP eCLIP6.29□□□□□ -1.4
RFC4-212ENST00000479307 SP140Q13342 867 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 SPHKAPQ2M3C7 1700 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 FMN1Q68DA7 1419 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 TRMT2AQ8IZ69 625 aaKnown RBP6.29□□□□□ -1.4
RFC4-212ENST00000479307 ZBTB34Q8NCN2 500 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 KAT5Q92993 513 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
RFC4-212ENST00000479307 GPHA2Q96T91 129 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 PDCD2LQ9BRP1 358 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 SENP6Q9GZR1 1112 aaPredicted RBP6.29□□□□□ -1.4
RFC4-212ENST00000479307 TMEM60Q9H2L4 133 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 ARNT2Q9HBZ2 717 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 IL23AQ9NPF7 189 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 CALCOCO1Q9P1Z2 691 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 OAZ3Q9UMX2 235 aa6.29□□□□□ -1.4
RFC4-212ENST00000479307 UNC13BO14795 1591 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 BLMP54132 1417 aaPredicted RBP6.28□□□□□ -1.4
RFC4-212ENST00000479307 MATN2O00339 956 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 TEX33O43247 280 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 B3GALT2O43825 422 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 GPR32O75388 356 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 TUSC2O75896 110 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 UBXN7O94888 489 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 FTLP02792 175 aaPredicted RBP6.28□□□□□ -1.4
RFC4-212ENST00000479307 HRGP04196 525 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 EPHB4P54760 987 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 NPEPPSP55786 919 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 PPP2CBP62714 309 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 PPP2CAP67775 309 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 OVCH2Q7RTZ1 564 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 ZNF572Q7Z3I7 529 aaPredicted RBP6.28□□□□□ -1.4
RFC4-212ENST00000479307 RSPH3Q86UC2 560 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 FAM43AQ8N2R8 423 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 C3orf20Q8ND61 904 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 OR5M3Q8NGP4 307 aa6.28□□□□□ -1.4
RFC4-212ENST00000479307 CCHCR1Q8TD31 782 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms