RNA–Protein interactions for RNA: ENST00000478887.1

SFI1-222, Transcript of SFI1 centrin binding protein, human

TSL 4

Gene SFI1, Length 662 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFI1-222	ENST00000478887	LMBRD1	Q9NUN5	540 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	PUF60	Q9UHX1	559 aa	Known RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	PRG3	Q9Y2Y8	225 aa	Predicted RBP	10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	DERA	Q9Y315	318 aa		10.32	□□□□□ -0.76
SFI1-222	ENST00000478887	LACTBL1	A8MY62	500 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887		F8W810	466 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	KIF4A	O95239	1232 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	CYP3A5	P20815	502 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	IRS1	P35568	1242 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	ZBTB6	Q15916	424 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	ZCWPW2	Q504Y3	356 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	GPD1L	Q8N335	351 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	GOLGA5	Q8TBA6	731 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	ERCC4	Q92889	916 aa	Predicted RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	C18orf25	Q96B23	403 aa	Predicted RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	SAAL1	Q96ER3	474 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	FAM213A	Q9BRX8	229 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	HERC2P3	Q9BVR0	1158 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	COLEC11	Q9BWP8	271 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	GTPBP4	Q9BZE4	634 aa	Known RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	PCIF1	Q9H4Z3	704 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	NSUN3	Q9H649	340 aa	Known RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	GOLGA2P5	Q9HBQ8	144 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	KIAA1586	Q9HCI6	787 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	NGRN	Q9NPE2	291 aa	Known RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	HSPBP1	Q9NZL4	362 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	CACNG4	Q9UBN1	327 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	TUBGCP4	Q9UGJ1	667 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	ADAM28	Q9UKQ2	775 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	UBQLN1	Q9UMX0	589 aa	Known RBP	10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	TRAF3IP3	Q9Y228	551 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	C2CD2	Q9Y426	696 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	PLXNA4	Q9HCM2	1894 aa		10.31	□□□□□ -0.76
SFI1-222	ENST00000478887	GOLGA6L22	H0YM25	854 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	PDXK	O00764	312 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	CLIC2	O15247	247 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	XPOT	O43592	962 aa	Known RBP	10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	IL18RAP	O95256	599 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	SOD2	P04179	222 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	NFIC	P08651	508 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	CTSA	P10619	480 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	LRPAP1	P30533	357 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	CLCNKB	P51801	687 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	WNT7B	P56706	349 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	ERVFC1	P60507	584 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	COL19A1	Q14993	1142 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	TMEM132D	Q14C87	1099 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	NFIL3	Q16649	462 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	UPP1	Q16831	310 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	JADE1	Q6IE81	842 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	FUT10	Q6P4F1	479 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	CD300LG	Q6UXG3	332 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	NT5DC4	Q86YG4	428 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	SLC9A9	Q8IVB4	645 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	VPS52	Q8N1B4	723 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	MICALL1	Q8N3F8	863 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	XXYLT1	Q8NBI6	393 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	C3orf58	Q8NDZ4	430 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	KIF12	Q96FN5	646 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	DDX27	Q96GQ7	796 aa	Known RBP	10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	TCF25	Q9BQ70	676 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	DMAC2	Q9NW81	257 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	RBAK	Q9NYW8	714 aa	Predicted RBP	10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	MAN1B1	Q9UKM7	699 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	PCDHGC5	Q9Y5F6	944 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	IRAK3	Q9Y616	596 aa		10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	TDRD15	B5MCY1	1934 aa	Known RBP	10.3	□□□□□ -0.76
SFI1-222	ENST00000478887	SF3B1	O75533	1304 aa	Known RBP eCLIP	10.3	□□□□□ -0.76	3e-6	■■■■■ 137.9
SFI1-222	ENST00000478887	GOLGA8IP	A6NC78	632 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	GOLGA8J	A6NMD2	632 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	PODXL	O00592	558 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	CSPG5	O95196	566 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	RPL9	P32969	192 aa	Known RBP	10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	CYP2J2	P51589	502 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	SPAG1	Q07617	926 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	ELAVL2	Q12926	359 aa	Known RBP	10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	MORC3	Q14149	939 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	MYBPC2	Q14324	1141 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	SMC1A	Q14683	1233 aa	Known RBP	10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	PTPN14	Q15678	1187 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	SNRNP35	Q16560	246 aa	Known RBP	10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	TCEAL5	Q5H9L2	206 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	SPATA1	Q5VX52	437 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	PLPP4	Q5VZY2	271 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	DCLRE1A	Q6PJP8	1040 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	ADGRD2	Q7Z7M1	963 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	CBWD2	Q8IUF1	395 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	EFCAB13	Q8IY85	973 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	GPR65	Q8IYL9	337 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	BEST2	Q8NFU1	509 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	RABGGTA	Q92696	567 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	PPP2R3C	Q969Q6	453 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	GPR62	Q9BZJ7	368 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	CLSTN2	Q9H4D0	955 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	ENTPD7	Q9NQZ7	604 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	CHST7	Q9NS84	486 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	TRANK1	O15050	2925 aa		10.29	□□□□□ -0.76
SFI1-222	ENST00000478887	ATG2A	Q2TAZ0	1938 aa		10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms