RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 LSSP48449 732 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 RAP2BP61225 183 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 SART3Q15020 963 aaKnown RBP4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 EZH2Q15910 746 aaKnown RBP4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 NFE2L2Q16236 605 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 PITRM1Q5JRX3 1037 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 KIAA0895LQ68EN5 471 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 KCTD10Q9H3F6 313 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 PRDM12Q9H4Q4 367 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 SPTLC3Q9NUV7 552 aa4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 CCDC9Q9Y3X0 531 aaKnown RBP4.87□□□□□ -1.63
NCKAP1-204ENST00000477988 FAM83GA6ND36 823 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 ASMTLO95671 621 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 SCNN1BP51168 640 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 LGALS4P56470 323 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 HSD11B2P80365 405 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 UBXN2BQ14CS0 331 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 C11orf74Q86VG3 221 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 REPS2Q8NFH8 660 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 PMFBP1Q8TBY8 1022 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 GPR101Q96P66 508 aaPredicted RBP4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 MRI1Q9BV20 369 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 OSBPL2Q9H1P3 480 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 MS4A5Q9H3V2 200 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 IL17RBQ9NRM6 502 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 TMEM260Q9NX78 707 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 MOCS1Q9NZB8 636 aa4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 CDK11AQ9UQ88 783 aaPredicted RBP4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 MTO1Q9Y2Z2 717 aaKnown RBP4.86□□□□□ -1.63
NCKAP1-204ENST00000477988 PRKCGP05129 697 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 IL2RBP14784 551 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 CANXP27824 592 aaKnown RBP4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 FAM180AQ6UWF9 173 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 LRRTM3Q86VH5 581 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 RASSF3Q86WH2 238 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 PDPRQ8NCN5 879 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 GPR156Q8NFN8 814 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 DPF1Q92782 380 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 MED15Q96RN5 788 aa4.85□□□□□ -1.63
NCKAP1-204ENST00000477988 AATKQ6ZMQ8 1374 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 ZNF804BA4D1E1 1349 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 MPPED1O15442 326 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 AKR1B10O60218 316 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 CBSLP0DN79 551 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 CKBP12277 381 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 ATP5JP18859 108 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 CBSP35520 551 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 SRSF7Q16629 238 aaKnown RBP eCLIP4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 NBPF8Q3BBV2 869 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 AFMIDQ63HM1 303 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 OTUD7BQ6GQQ9 843 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 AHI1Q8N157 1196 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 SSH3Q8TE77 659 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 SH3TC2Q8TF17 1288 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 RIN2Q8WYP3 895 aaPredicted RBP4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 CPNE5Q9HCH3 593 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 FLRT1Q9NZU1 646 aa4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 NOC2LQ9Y3T9 749 aaKnown RBP4.84□□□□□ -1.63
NCKAP1-204ENST00000477988 KAT6AQ92794 2004 aa4.84□□□□□ -1.64
NCKAP1-204ENST00000477988 CCDC78A2IDD5 438 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 LPLP06858 475 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 ECHS1P30084 290 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 PTGER1P34995 402 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 SSBP2P81877 361 aaPredicted RBP4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 BROXQ5VW32 411 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 PPM1KQ8N3J5 372 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 PNKPQ96T60 521 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 USP25Q9UHP3 1055 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 SIK3Q9Y2K2 1263 aa4.83□□□□□ -1.64
NCKAP1-204ENST00000477988 TRGV11A0A075B6L2 103 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 MANSC4A6NHS7 340 aaPredicted RBP4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 E9PSI1 815 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 YY2O15391 372 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 FKBP9O95302 570 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 RAP2AP10114 183 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 SRGNP10124 158 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 ITPKBP27987 946 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 ADSLP30566 484 aaPredicted RBP4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 SREBF1P36956 1147 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 GRIA3P42263 894 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 IL2P60568 153 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 TCEA2Q15560 299 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 UGT8Q16880 541 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 CT83Q5H943 113 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 KAZNQ674X7 775 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 C11orf87Q6NUJ2 197 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 VWA1Q6PCB0 445 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 Q6ZVL8 140 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 FKBP9P1Q75LS8 142 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 OR2W6PQ8NHA6 318 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 NUP133Q8WUM0 1156 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 DDB2Q92466 427 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 RAX2Q96IS3 184 aa4.82□□□□□ -1.64
NCKAP1-204ENST00000477988 CNTNAP2Q9UHC6 1331 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 TEX33O43247 280 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 PROM1O43490 865 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 PRSS23O95084 383 aa4.81□□□□□ -1.64
NCKAP1-204ENST00000477988 CCKBRP32239 447 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms