RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 PTPRHQ9HD43 1115 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 ARHGEF3Q9NR81 526 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 SLC2A4RGQ9NR83 387 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 TOPORSQ9NS56 1045 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-236ENST00000477477 ARHGAP28Q9P2N2 729 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 CDH7Q9ULB5 785 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 DNM3Q9UQ16 869 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 BACE2Q9Y5Z0 518 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 DOCK8Q8NF50 2099 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 DMDP11532 3685 aa12.48□□□□□ -0.41
HDLBP-236ENST00000477477 VPS13AQ96RL7 3174 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 SMIM28A0A1B0GU29 152 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 CDC25AP30304 524 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 OR1D2P34982 312 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 SOX4Q06945 474 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 AXDND1Q5T1B0 1012 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 PHLDB3Q6NSJ2 640 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 RINT1Q6NUQ1 792 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 ALKAL1Q6UXT8 129 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 RSPO2Q6UXX9 243 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 ANKS3Q6ZW76 656 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 C1orf186Q6ZWK4 172 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 KCNK18Q7Z418 384 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 C3orf58Q8NDZ4 430 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 ST13P5Q8NFI4 369 aaPredicted RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 FGF13Q92913 245 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 FGF14Q92915 247 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 DDX27Q96GQ7 796 aaKnown RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 SNX27Q96L92 541 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 DRC1Q96MC2 740 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 MMTAG2Q9BU76 263 aaKnown RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 TARS2Q9BW92 718 aaKnown RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 C17orf75Q9HAS0 396 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 KMT5AQ9NQR1 393 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 POLIQ9UNA4 740 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 CDY1Q9Y6F8 540 aa12.47□□□□□ -0.41
HDLBP-236ENST00000477477 MTCL1Q9Y4B5 1905 aaKnown RBP12.47□□□□□ -0.41
HDLBP-236ENST00000477477 I3L4J1 428 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 ABLIM1O14639 778 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 MCF2P10911 925 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 PROZP22891 400 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 BRCC3P46736 316 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 OSTNP61366 133 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 C8orf34Q49A92 452 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 PARM1Q6UWI2 310 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 DTHD1Q6ZMT9 781 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 MTSS1LQ765P7 747 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 RTL10Q7L3V2 364 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 NKD2Q969F2 451 aaPredicted RBP12.46□□□□□ -0.41
HDLBP-236ENST00000477477 ZMAT2Q96NC0 199 aaKnown RBP12.46□□□□□ -0.41
HDLBP-236ENST00000477477 RPP25Q9BUL9 199 aaKnown RBP12.46□□□□□ -0.41
HDLBP-236ENST00000477477 TIPINQ9BVW5 301 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 SLC38A7Q9NVC3 462 aa12.46□□□□□ -0.41
HDLBP-236ENST00000477477 RBM19Q9Y4C8 960 aaKnown RBP12.46□□□□□ -0.41
HDLBP-236ENST00000477477 VWA8A3KMH1 1905 aa12.46□□□□□ -0.42
HDLBP-236ENST00000477477 PODXLO00592 558 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 KCNE1P15382 129 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 GUCY2CP25092 1073 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 GPC5P78333 572 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 ATP2C1P98194 919 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 PABPC1LQ4VXU2 614 aaKnown RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 RILPL1Q5EBL4 403 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 HYIQ5T013 277 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 SLC8B1Q6J4K2 584 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 MPZL3Q6UWV2 235 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 NPAS3Q8IXF0 933 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 ACAP3Q96P50 834 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 NTPCRQ9BSD7 190 aaKnown RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 HCFC1R1Q9NWW0 138 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 CNTN3Q9P232 1028 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 DNMT3BQ9UBC3 853 aaKnown RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 KIF3AQ9Y496 699 aa12.45□□□□□ -0.42
HDLBP-236ENST00000477477 PTPRZ1P23471 2315 aaPredicted RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 RIF1Q5UIP0 2472 aaKnown RBP12.45□□□□□ -0.42
HDLBP-236ENST00000477477 SFI1A8K8P3 1242 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 SYN3O14994 580 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 SLC16A4O15374 487 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 MEFVO15553 781 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-236ENST00000477477 DCNP07585 359 aaKnown RBP12.44□□□□□ -0.42
HDLBP-236ENST00000477477 HARSP12081 509 aaKnown RBP12.44□□□□□ -0.42
HDLBP-236ENST00000477477 ROR1Q01973 937 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 VARS2Q5ST30 1063 aaKnown RBP12.44□□□□□ -0.42
HDLBP-236ENST00000477477 MCTP1Q6DN14 999 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 KCTD17Q8N5Z5 321 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 PJA1Q8NG27 643 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 SPIRE2Q8WWL2 714 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 TCHPQ9BT92 498 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 SIT1Q9Y3P8 196 aa12.44□□□□□ -0.42
HDLBP-236ENST00000477477 ARHGEF37A1IGU5 675 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 WDR27A2RRH5 827 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 TBC1D4O60343 1298 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 TOM1L1O75674 476 aa12.43□□□□□ -0.42
HDLBP-236ENST00000477477 RHOP08100 348 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms