RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 E9PBE3 544 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 BUD23O43709 281 aaKnown RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 FKBP6O75344 327 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ESRRAP11474 423 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 CHKAP35790 457 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ACTR3P61158 418 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 PDCD4Q53EL6 469 aaKnown RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 MFSD4BQ5TF39 518 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 TMCO4Q5TGY1 634 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 KLHDC10Q6PID8 442 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 RBM44Q6ZP01 1051 aaKnown RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 LRRC6Q86X45 466 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 BBS5Q8N3I7 341 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 SYT2Q8N9I0 419 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 LNX1Q8TBB1 728 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 SH3RF3Q8TEJ3 882 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ISCA1Q9BUE6 129 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 PFDN4Q9NQP4 134 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 NINJ2Q9NZG7 142 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 TRAF3IP3Q9Y228 551 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ZNF711Q9Y462 761 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ALS2Q96Q42 1657 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 GLI3P10071 1580 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 MAGEB3O15480 346 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 PAX3P23760 479 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 CLCN2P51788 898 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 CHN2P52757 468 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ORC2Q13416 577 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 PLEKHG4Q58EX7 1191 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 C11orf63Q6NUN7 778 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 AADACL2Q6P093 401 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 LRRC8BQ6P9F7 803 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 KLHL35Q6PF15 583 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 OLFML1Q6UWY5 402 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 TOM1L2Q6ZVM7 507 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 RAD54LQ92698 747 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 GPKOWQ92917 476 aaPredicted RBP eCLIP14.67□□□□□ -0.062e-7■□□□□ 11.3
HDAC1-206ENST00000476391 FAM161BQ96MY7 647 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 CCDC85AQ96PX6 553 aaPredicted RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 CNNM1Q9NRU3 951 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 DDX18Q9NVP1 670 aaKnown RBP14.67□□□□□ -0.06
HDAC1-206ENST00000476391 HDAC9Q9UKV0 1011 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 DMTF1Q9Y222 760 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 EFR3BQ9Y2G0 817 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ALG6Q9Y672 507 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ARAP2Q8WZ64 1704 aa14.67□□□□□ -0.06
HDAC1-206ENST00000476391 ARHGAP10A1A4S6 786 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 CIB2O75838 187 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 PDE5AO76074 875 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ALDH2P05091 517 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 PHKG2P15735 406 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 GEMIN4P57678 1058 aaKnown RBP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 TBL3Q12788 808 aaKnown RBP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 COASYQ13057 564 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 EDRF1Q3B7T1 1238 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 FAM26FQ5R3K3 315 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 FAM91A1Q658Y4 838 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 AAGABQ6PD74 315 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 RELL1Q8IUW5 271 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 RHOT2Q8IXI1 618 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ERMNQ8TAM6 284 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 CCDC110Q8TBZ0 833 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 PNMA5Q96PV4 448 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ZSWIM1Q9BR11 485 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ZBTB3Q9H5J0 574 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 LRRC19Q9H756 370 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 HEY2Q9UBP5 337 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 GRID1Q9ULK0 1009 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 TELO2Q9Y4R8 837 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 IGSF9BQ9UPX0 1349 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 CCNT1O60563 726 aaKnown RBP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 CBFA2T3O75081 653 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 VCLP18206 1134 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 RAB15P59190 212 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ARHGAP4P98171 946 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 TMED2Q15363 201 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 TMEM53Q6P2H8 277 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 Q6ZNX1 250 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 TMPRSS6Q8IU80 811 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 ZNF75CPQ92670 426 aaPredicted RBP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 SKA1Q96BD8 255 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 SNF8Q96H20 258 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 RBM38Q9H0Z9 239 aaKnown RBP14.66□□□□□ -0.06
HDAC1-206ENST00000476391 KANSL3Q9P2N6 904 aa14.66□□□□□ -0.06
HDAC1-206ENST00000476391 SPAG7O75391 227 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 ABHD2P08910 425 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 PYGMP11217 842 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 STAT1P42224 750 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 TMEM132AQ24JP5 1023 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 SYDE1Q6ZW31 735 aaPredicted RBP14.65□□□□□ -0.06
HDAC1-206ENST00000476391 FRMD5Q7Z6J6 570 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 TTC1Q99614 292 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 HNRNPABQ99729 332 aaKnown RBP14.65□□□□□ -0.06
HDAC1-206ENST00000476391 ZNF180Q9UJW8 692 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 MTO1Q9Y2Z2 717 aaKnown RBP14.65□□□□□ -0.06
HDAC1-206ENST00000476391 NR2E3Q9Y5X4 410 aa14.65□□□□□ -0.06
HDAC1-206ENST00000476391 ANKRD62A6NC57 917 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms