RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ANKRD35Q8N283 1001 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 MB21D1Q8N884 522 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 SLC35B2Q8TB61 432 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 RGMAQ96B86 450 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 SCAND2PQ9GZW5 306 aaPredicted RBP6.36□□□□□ -1.39
PTCD3-211ENST00000476215 KCNH6Q9H252 994 aa6.36□□□□□ -1.39
PTCD3-211ENST00000476215 LRRC14BA6NHZ5 514 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 CXorf49A8MYA2 514 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-211ENST00000476215 B5MCH6 92 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 IPO13O94829 963 aaKnown RBP6.35□□□□□ -1.39
PTCD3-211ENST00000476215 SLPIP03973 132 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 MYBP10242 640 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 ATP8B2P98198 1209 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 RAB39AQ14964 217 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 NRN1LQ496H8 165 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 CCDC157Q569K6 752 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 FAM83AQ86UY5 434 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 TMPRSS6Q8IU80 811 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 C3orf20Q8ND61 904 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 IFI44Q8TCB0 444 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 ST8SIA2Q92186 375 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 CCDC136Q96JN2 1154 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 MRGPRX4Q96LA9 322 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 C8orf48Q96LL4 319 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 DMRTA2Q96SC8 542 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 ACO2Q99798 780 aaKnown RBP6.35□□□□□ -1.39
PTCD3-211ENST00000476215 VRK1Q99986 396 aaPredicted RBP6.35□□□□□ -1.39
PTCD3-211ENST00000476215 MRI1Q9BV20 369 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 LSM14BQ9BX40 385 aaKnown RBP6.35□□□□□ -1.39
PTCD3-211ENST00000476215 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 KMT5AQ9NQR1 393 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 CEP72Q9P209 647 aa6.35□□□□□ -1.39
PTCD3-211ENST00000476215 CAPN14A8MX76 684 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 PRR5-ARHGAP8B1AHC4 643 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ERC2O15083 957 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 SLC16A6O15403 523 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 PEX11BO96011 259 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 FSHBP01225 129 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ALDH2P05091 517 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 SNRPA1P09661 255 aaKnown RBP6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ATP5JP18859 108 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 HIBADHP31937 336 aaKnown RBP6.34□□□□□ -1.39
PTCD3-211ENST00000476215 MAP2K6P52564 334 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ZNF280AP59817 542 aaPredicted RBP6.34□□□□□ -1.39
PTCD3-211ENST00000476215 CTXN1P60606 82 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 RAP2BP61225 183 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 CREMQ03060 361 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 TLE1Q04724 770 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ATP2B3Q16720 1220 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 KHDC1Q4VXA5 237 aaKnown RBP6.34□□□□□ -1.39
PTCD3-211ENST00000476215 DOK3Q7L591 496 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 DENND1CQ8IV53 801 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 GSPT2Q8IYD1 628 aaKnown RBP6.34□□□□□ -1.39
PTCD3-211ENST00000476215 AMER2Q8N7J2 671 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 ZBTB34Q8NCN2 500 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 MIEF2Q96C03 454 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 RUNDC1Q96C34 613 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 SPON1Q9HCB6 807 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 MAN1C1Q9NR34 630 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 CALCOCO1Q9P1Z2 691 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 POLHQ9Y253 713 aa6.34□□□□□ -1.39
PTCD3-211ENST00000476215 TBKBP1A7MCY6 615 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 PJA2O43164 708 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 HK1P19367 917 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 CLRN1P58418 232 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 NOGQ13253 232 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 BMT2Q1RMZ1 405 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 OTUD7BQ6GQQ9 843 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 USP51Q70EK9 711 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 C1orf210Q8IVY1 113 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 MDGA1Q8NFP4 955 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 PPP1R35Q8TAP8 253 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 TFAP2CQ92754 450 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 CGRRF1Q99675 332 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 MYOCQ99972 504 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 C1orf112Q9NSG2 853 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 PCDHA3Q9Y5H8 950 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 NR2E3Q9Y5X4 410 aa6.33□□□□□ -1.4
PTCD3-211ENST00000476215 H3BML4 177 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 NARSO43776 548 aaKnown RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 C1SP09871 688 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 MALP21145 153 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 SMARCA1P28370 1054 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 HK3P52790 923 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 RABGGTBP53611 331 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 RRP1BQ14684 758 aaKnown RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 NAIF1Q69YI7 327 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 EFCAB12Q6NXP0 572 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 ZNF529Q6P280 563 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 PLXDC1Q8IUK5 500 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 DCBLD1Q8N8Z6 715 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 RNF169Q8NCN4 708 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 ATXN2LQ8WWM7 1075 aaKnown RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 FAM193BQ96PV7 902 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 CPEB1Q9BZB8 566 aaKnown RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 C11orf54Q9H0W9 315 aaPredicted RBP6.32□□□□□ -1.4
PTCD3-211ENST00000476215 PRDM11Q9NQV5 511 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 OBP2AQ9NY56 170 aa6.32□□□□□ -1.4
PTCD3-211ENST00000476215 DDX20Q9UHI6 824 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms