RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ABLIM1O14639 778 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 GPR182O15218 404 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 CSDE1O75534 798 aaKnown RBP13.21□□□□□ -0.29
MRPL55-227ENST00000475832 RPS6KA5O75582 802 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 OFD1O75665 1012 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 TMEM191BP0C7N4 346 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 FECHP22830 423 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.29
MRPL55-227ENST00000475832 THPOP40225 353 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 GRM5P41594 1212 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 STAT1P42224 750 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 MFAP3P55082 362 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 OSTNP61366 133 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ASIC2Q16515 512 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 EPC2Q52LR7 807 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 SV2AQ7L0J3 742 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ENOSF1Q7L5Y1 443 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ANKRD33Q7Z3H0 272 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 VPS36Q86VN1 386 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 CCDC170Q8IYT3 715 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 TXLNBQ8N3L3 684 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 CCDC42Q96M95 316 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 STK33Q9BYT3 514 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ASB7Q9H672 318 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
MRPL55-227ENST00000475832 CHST12Q9NRB3 414 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 TOPORSQ9NS56 1045 aaPredicted RBP13.21□□□□□ -0.29
MRPL55-227ENST00000475832 C1orf112Q9NSG2 853 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 PYCARDQ9ULZ3 195 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 COQ4Q9Y3A0 265 aa13.21□□□□□ -0.29
MRPL55-227ENST00000475832 ARVCFO00192 962 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TLR3O15455 904 aaKnown RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 B4GALT4O60513 344 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 NOL4O94818 638 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 NPTXRO95502 500 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 ACTN1P12814 892 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 FERP16591 822 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 ZSCAN20P17040 1043 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 FGFR4P22455 802 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TNFSF9P41273 254 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 CDK7P50613 346 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 KRT83P78385 493 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TRPC3Q13507 836 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 MEA1Q16626 185 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 ZACNQ401N2 412 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TRIM60Q495X7 471 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 SEZ6Q53EL9 994 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 C1orf220Q5T0J3 134 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 CDR2LQ86X02 465 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 NT5DC4Q86YG4 428 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 USP38Q8NB14 1042 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 SLC43A3Q8NBI5 491 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 BAP1Q92560 729 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TOX2Q96NM4 488 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 TSPAN18Q96SJ8 248 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 POP1Q99575 1024 aaKnown RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 CDX2Q99626 313 aaPredicted RBP13.2□□□□□ -0.3
MRPL55-227ENST00000475832 PLEKHA5Q9HAU0 1116 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 CDHR5Q9HBB8 845 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 DNAJC12Q9UKB3 198 aa13.2□□□□□ -0.3
MRPL55-227ENST00000475832 LAMA2P24043 3122 aaKnown RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 MROH7Q68CQ1 1323 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 EPHB6O15197 1021 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 ZNF500O60304 480 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 FAM189A1O60320 539 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 SERPING1P05155 500 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 CTSHP09668 335 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 CCDC175P0C221 793 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 TFAMQ00059 246 aaKnown RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 KLHL30Q0D2K2 578 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 SPA17Q15506 151 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 ENOX2Q16206 610 aaKnown RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 ZBTB41Q5SVQ8 909 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 IQCEQ6IPM2 695 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 FAM43BQ6ZT52 329 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 UBE2TQ9NPD8 197 aaPredicted RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
MRPL55-227ENST00000475832 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 SQORQ9Y6N5 450 aa13.19□□□□□ -0.3
MRPL55-227ENST00000475832 SOWAHDA6NJG2 315 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 XPOTO43592 962 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 AKR1B10O60218 316 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 CXCL8P10145 99 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 ANXA13P27216 316 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 HOXA11P31270 313 aaPredicted RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TLE2Q04725 743 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 NFX1Q12986 1120 aaKnown RBP13.18□□□□□ -0.3
MRPL55-227ENST00000475832 PAK2Q13177 524 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 BFSP2Q13515 415 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
MRPL55-227ENST00000475832 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms