RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 EFCAB13Q8IY85 973 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 FAM186BQ8IYM0 893 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 GZF1Q9H116 711 aaPredicted RBP24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 NKX2-4Q9H2Z4 354 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 NRDE2Q9H7Z3 1164 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 DERAQ9Y315 318 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 C2CD2Q9Y426 696 aa24.06■■□□□ 1.44
MCF2L2-209ENST00000475664 EPB41P11171 864 aaKnown RBP24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 DNAJB2P25686 324 aa24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 PLEKHO2Q8TD55 490 aa24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 CLP1Q92989 425 aaKnown RBP24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 KIF12Q96FN5 646 aa24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 BORCS6Q96GS4 357 aa24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 SLC38A7Q9NVC3 462 aa24.05■■□□□ 1.44
MCF2L2-209ENST00000475664 TAP1Q03518 808 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 SOX4Q06945 474 aaPredicted RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 TUSC3Q13454 348 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 TMEM132DQ14C87 1099 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 FILIP1Q7Z7B0 1213 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 NT5DC4Q86YG4 428 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 COLGALT2Q8IYK4 626 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 ENOX1Q8TC92 643 aaKnown RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 C18orf25Q96B23 403 aaPredicted RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 CCDC127Q96BQ5 260 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 FAM193BQ96PV7 902 aaPredicted RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 SRRTQ9BXP5 876 aaKnown RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 DNAJB4Q9UDY4 337 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 TUBGCP4Q9UGJ1 667 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 UBQLN1Q9UMX0 589 aaKnown RBP24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 PTPRJQ12913 1337 aa24.04■■□□□ 1.44
MCF2L2-209ENST00000475664 LAMA3Q16787 3333 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 LAG3P18627 525 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 MCCD1P59942 119 aaPredicted RBP24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 ENPEPQ07075 957 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 SPATA1Q5VX52 437 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 INTS8Q75QN2 995 aaKnown RBP24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 TMC2Q8TDI7 906 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 PARD3BQ8TEW8 1205 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 CGRRF1Q99675 332 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 TMEM175Q9BSA9 504 aa24.03■■□□□ 1.44
MCF2L2-209ENST00000475664 ZC3H11AO75152 810 aaKnown RBP eCLIP24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 FGFR1OPO95684 399 aaKnown RBP24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 CYP3A5P20815 502 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 BCAR1P56945 870 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 BFSP1Q12934 665 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 SPRED2Q7Z698 418 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 WDR49Q8IV35 697 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 TIFAQ96CG3 184 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 FNBP1Q96RU3 617 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 BPIFA3Q9BQP9 254 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 NAT10Q9H0A0 1025 aaKnown RBP24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 GOLGA2P5Q9HBQ8 144 aa24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.02■■□□□ 1.44
MCF2L2-209ENST00000475664 CASTOR2A6NHX0 329 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 SOX1O00570 391 aaPredicted RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 XPOTO43592 962 aaKnown RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 GALTP07902 379 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 DLATP10515 647 aaKnown RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 KRT13P13646 458 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 SLC11A1P49279 550 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 VAMP7P51809 220 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 CLDN10P78369 228 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 TPD52L1Q16890 204 aaPredicted RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 C1orf220Q5T0J3 134 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 SPOUT1Q5T280 376 aaKnown RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 PPP2R2DQ66LE6 453 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 TMEM130Q8N3G9 435 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 COLGALT1Q8NBJ5 622 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 BEST2Q8NFU1 509 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 FAM84AQ96KN4 292 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 POP1Q99575 1024 aaKnown RBP24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 INTS13Q9NVM9 706 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 CACNG4Q9UBN1 327 aa24.01■■□□□ 1.43
MCF2L2-209ENST00000475664 LRRIQ3A6PVS8 624 aaPredicted RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 TULP1O00294 542 aaPredicted RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 GNA14O95837 355 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 LRPAP1P30533 357 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 PBX3P40426 434 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 GUCY2FP51841 1108 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 MARSP56192 900 aaKnown RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 ERVK-21P61565 698 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 DLG4P78352 724 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 TFAMQ00059 246 aaKnown RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 MYL5Q02045 173 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 LMBRD2Q68DH5 695 aaPredicted RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 KCNT2Q6UVM3 1135 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 FRMD5Q7Z6J6 570 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 IRF2BP1Q8IU81 584 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 OR5B17Q8NGF7 314 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 UROC1Q96N76 676 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 ZNF558Q96NG5 402 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 SAMD11Q96NU1 681 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 TGS1Q96RS0 853 aaKnown RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 PAAF1Q9BRP4 392 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 C17orf80Q9BSJ5 609 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 MTMR12Q9C0I1 747 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 THAP9Q9H5L6 903 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 SLC28A3Q9HAS3 691 aa24■■□□□ 1.43
MCF2L2-209ENST00000475664 METTL14Q9HCE5 456 aaKnown RBP24■■□□□ 1.43
MCF2L2-209ENST00000475664 AAASQ9NRG9 546 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms