RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 ORC2Q13416 577 aaPredicted RBP13.66□□□□□ -0.22
CCDC57-208ENST00000475635 MLF2Q15773 248 aaPredicted RBP13.66□□□□□ -0.22
CCDC57-208ENST00000475635 UPP1Q16831 310 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 PABPC1LQ4VXU2 614 aaKnown RBP13.66□□□□□ -0.22
CCDC57-208ENST00000475635 NT5DC1Q5TFE4 455 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 ATF7IP2Q5U623 682 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 HAUS3Q68CZ6 603 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 CD300LGQ6UXG3 332 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 RSPO2Q6UXX9 243 aaPredicted RBP13.66□□□□□ -0.22
CCDC57-208ENST00000475635 NPAS3Q8IXF0 933 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 C8orf76Q96K31 380 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 IFT74Q96LB3 600 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 KXD1Q9BQD3 176 aa13.66□□□□□ -0.22
CCDC57-208ENST00000475635 DNMT3BQ9UBC3 853 aaKnown RBP13.66□□□□□ -0.22
CCDC57-208ENST00000475635 SPTBN2O15020 2390 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 I3L4J1 428 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 MUTP22033 750 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 TKTP29401 623 aaKnown RBP13.65□□□□□ -0.22
CCDC57-208ENST00000475635 CCT6AP40227 531 aaKnown RBP13.65□□□□□ -0.22
CCDC57-208ENST00000475635 PFKPQ01813 784 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 PRKCQQ04759 706 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 ECM1Q16610 540 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 SLC44A4Q53GD3 710 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 APBB1IPQ7Z5R6 666 aaPredicted RBP13.65□□□□□ -0.22
CCDC57-208ENST00000475635 C3orf58Q8NDZ4 430 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 ING5Q8WYH8 240 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 KIFAP3Q92845 792 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 DDX27Q96GQ7 796 aaKnown RBP13.65□□□□□ -0.22
CCDC57-208ENST00000475635 UROC1Q96N76 676 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 HINFPQ9BQA5 517 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 DDX23Q9BUQ8 820 aaKnown RBP13.65□□□□□ -0.22
CCDC57-208ENST00000475635 BHMT2Q9H2M3 363 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 GOLGA2P5Q9HBQ8 144 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 KCNH3Q9ULD8 1083 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 BACE2Q9Y5Z0 518 aa13.65□□□□□ -0.22
CCDC57-208ENST00000475635 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 K7ERI5 159 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 TRAPPC3O43617 180 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 BRCC3P46736 316 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 UBXN2BQ14CS0 331 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 TTC38Q5R3I4 469 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 ANKS3Q6ZW76 656 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 RTL10Q7L3V2 364 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 KIAA2013Q8IYS2 634 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 MAML2Q8IZL2 1156 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 BCO2Q9BYV7 579 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 FOXP1Q9H334 677 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 SPATA6Q9NWH7 488 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 DAXXQ9UER7 740 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 KIAA1024Q9UPX6 916 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 TNFSF13BQ9Y275 285 aa13.64□□□□□ -0.23
CCDC57-208ENST00000475635 MRPS23Q9Y3D9 190 aaKnown RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 MTF2Q9Y483 593 aaPredicted RBP13.64□□□□□ -0.23
CCDC57-208ENST00000475635 ZNF638Q14966 1978 aaKnown RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 FAM170BA6NMN3 283 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 CCDC169A6NNP5 214 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 RHOP08100 348 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 FXR2P51116 673 aaKnown RBP eCLIP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 YARSP54577 528 aaKnown RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 OSTNP61366 133 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 SOX4Q06945 474 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 SLC5A9Q2M3M2 681 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 CEP120Q8N960 986 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 ZNF461Q8TAF7 563 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 RMDN1Q96DB5 314 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 MCRS1Q96EZ8 462 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 CCDC94Q9BW85 323 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 CDT1Q9H211 546 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 LTB4R2Q9NPC1 389 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 TOPORSQ9NS56 1045 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 LRWD1Q9UFC0 647 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 COL4A2P08572 1712 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 KIF26AQ9ULI4 1882 aaPredicted RBP13.63□□□□□ -0.23
CCDC57-208ENST00000475635 PHLPP2Q6ZVD8 1323 aa13.63□□□□□ -0.23
CCDC57-208ENST00000475635 TCHHQ07283 1943 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 KINO60870 393 aaKnown RBP13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ECI2O75521 394 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 CD72P21854 359 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 GRM5P41594 1212 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 TRAPPC10P48553 1259 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 PEX3P56589 373 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ROR1Q01973 937 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 GNL2Q13823 731 aaKnown RBP13.62□□□□□ -0.23
CCDC57-208ENST00000475635 NBR1Q14596 966 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ZNF568Q3ZCX4 644 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
CCDC57-208ENST00000475635 SLC8B1Q6J4K2 584 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ALKAL1Q6UXT8 129 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 DCLK2Q8N568 766 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 C4orf32Q8N8J7 132 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 RUBCNQ92622 972 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ACO2Q99798 780 aaKnown RBP13.62□□□□□ -0.23
CCDC57-208ENST00000475635 OSBPL6Q9BZF3 934 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 PTPRHQ9HD43 1115 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 DDX19AQ9NUU7 478 aaKnown RBP13.62□□□□□ -0.23
CCDC57-208ENST00000475635 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 GDE1Q9NZC3 331 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 LIMCH1Q9UPQ0 1083 aa13.62□□□□□ -0.23
CCDC57-208ENST00000475635 ARHGEF37A1IGU5 675 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms