RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 RPS16P62249 146 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 EXOSC9Q06265 439 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 GALNT1Q10472 559 aaPredicted RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 BIRC3Q13489 604 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 ACAP1Q15027 740 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 PCOLCEQ15113 449 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 KCNMB1Q16558 191 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 DACT2Q5SW24 774 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 PRAMEF14Q5SWL7 426 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 TRMT10BQ6PF06 316 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 LVRNQ6Q4G3 990 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 TTLL6Q8N841 843 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 SPATA5Q8NB90 893 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 PLA2G15Q8NCC3 412 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 BRIX1Q8TDN6 353 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 SGPP1Q9BX95 441 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 DPH1Q9BZG8 443 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 MCOLN1Q9GZU1 580 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 KIAA1683Q9H0B3 1180 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 SMURF2Q9HAU4 748 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 SACM1LQ9NTJ5 587 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 AFF4Q9UHB7 1163 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 GTF2A1LQ9UNN4 478 aa6.64□□□□□ -1.35
SDHB-205ENST00000475506 RUVBL1Q9Y265 456 aaKnown RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 CTDP1Q9Y5B0 961 aaPredicted RBP6.64□□□□□ -1.35
SDHB-205ENST00000475506 hCG_1642624A0A1W2PR95 340 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 DAPK3O43293 454 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 GASTP01350 101 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 PLA2G1BP04054 148 aaKnown RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 CD1AP06126 327 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 ALOX15P16050 662 aaPredicted RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 PFKLP17858 780 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 IL13P35225 146 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 KIR2DL3P43628 341 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 ALDH1A3P47895 512 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 SOX8P57073 446 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 ARL13BQ3SXY8 428 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 CCDC38Q502W7 563 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 ALFQ53S48 1182 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 EMC10Q5UCC4 262 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 GGT6Q6P531 493 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 SYTL1Q8IYJ3 562 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 ATP11CQ8NB49 1132 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 MDM1Q8TC05 714 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 KBTBD7Q8WVZ9 684 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 CASKIN2Q8WXE0 1202 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 GFM2Q969S9 779 aaKnown RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 NMD3Q96D46 503 aaKnown RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 SUCLG2Q96I99 432 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 MYOCQ99972 504 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 BRIP1Q9BX63 1249 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 MYO1AQ9UBC5 1043 aa6.63□□□□□ -1.35
SDHB-205ENST00000475506 RBM8AQ9Y5S9 174 aaKnown RBP6.63□□□□□ -1.35
SDHB-205ENST00000475506 PEX10O60683 326 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 PLA2G6O60733 806 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ZNF28P17035 718 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ITGB5P18084 799 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 FGFR2P21802 821 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 PTPN7P35236 360 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 PHKA1P46020 1223 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 MRE11P49959 708 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ICA1Q05084 483 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 STARD3Q14849 445 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ZNF572Q7Z3I7 529 aaPredicted RBP6.62□□□□□ -1.35
SDHB-205ENST00000475506 MICU3Q86XE3 530 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ZNF527Q8NB42 609 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 TNPO1Q92973 898 aaKnown RBP6.62□□□□□ -1.35
SDHB-205ENST00000475506 PPP1R16BQ96T49 567 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 ISCA1Q9BUE6 129 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 MYLK2Q9H1R3 596 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 GCM1Q9NP62 436 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 CNNM1Q9NRU3 951 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 TMEM140Q9NV12 185 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 SPATA6Q9NWH7 488 aaPredicted RBP6.62□□□□□ -1.35
SDHB-205ENST00000475506 GRHPRQ9UBQ7 328 aa6.62□□□□□ -1.35
SDHB-205ENST00000475506 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.62□□□□□ -1.35
SDHB-205ENST00000475506 ZMYM3Q14202 1370 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 TRIM43BA6NCK2 446 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 HYAL3O43820 417 aaPredicted RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 TOX4O94842 621 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 CSTBP04080 98 aaKnown RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 THP07101 528 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 VEGFAP15692 232 aaPredicted RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 EEF1GP26641 437 aaKnown RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 PIK3CGP48736 1102 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 SESN2P58004 480 aaPredicted RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 ADAM8P78325 824 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 BLMHQ13867 455 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 ZNF827Q17R98 1081 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 MFSD14BQ5SR56 506 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 PGBD2Q6P3X8 592 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 PLXDC1Q8IUK5 500 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 RTKN2Q8IZC4 609 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 TRIM43Q96BQ3 446 aaPredicted RBP6.61□□□□□ -1.35
SDHB-205ENST00000475506 TBC1D20Q96BZ9 403 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 CEP95Q96GE4 821 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 KCNH6Q9H252 994 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 SLC23A1Q9UHI7 598 aa6.61□□□□□ -1.35
SDHB-205ENST00000475506 ANAPC4Q9UJX5 808 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms