RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 PLEKHH3Q7Z736 793 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 EMID1Q96A84 441 aaPredicted RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 FAM212AQ96EL1 285 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 HINFPQ9BQA5 517 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 KATNBL1Q9H079 304 aa16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 DMGDHQ9UI17 866 aaKnown RBP16.5■□□□□ 0.23
RPUSD3-215ENST00000475470 BPIFB4P59827 614 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 CUL2Q13617 745 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 NCOA4Q13772 614 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 TCEAL1Q15170 157 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 FAM110CQ1W6H9 321 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 TSHZ1Q6ZSZ6 1077 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 WDR49Q8IV35 697 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 MAML3Q96JK9 1138 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 FZD8Q9H461 694 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 STIM2Q9P246 746 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 PCDHB2Q9Y5E7 798 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 PGRMC1O00264 195 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF286BP0CG31 522 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 MAPK4P31152 587 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 PTENP60484 403 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 GRM1Q13255 1194 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 CASP8Q14790 479 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.49■□□□□ 0.238e-7■■■■■ 32.7
RPUSD3-215ENST00000475470 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 APOBEC3GQ9HC16 384 aaKnown RBP16.49■□□□□ 0.23
RPUSD3-215ENST00000475470 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ABLIM1O14639 778 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 MAGEB2O15479 319 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 PPFIA4O75335 1185 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 TBXAS1P24557 533 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 TNNC1P63316 161 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 SURF1Q15526 300 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF568Q3ZCX4 644 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ACAD10Q6JQN1 1059 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 KRT12Q99456 494 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 CPSF3Q9UKF6 684 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ZHX1Q9UKY1 873 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 B4GALT5O43286 388 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 CALCAP01258 141 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 MBTD1Q05BQ5 628 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 SMC1AQ14683 1233 aaKnown RBP16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 C11orf63Q6NUN7 778 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 THNSL1Q8IYQ7 743 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF653Q96CK0 615 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 PCDHB4Q9Y5E5 795 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 ALG6Q9Y672 507 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 EVPLQ92817 2033 aa16.48■□□□□ 0.23
RPUSD3-215ENST00000475470 A0A0U1RQG5 324 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 ATMINO43313 823 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 CLTAP09496 248 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 PROZP22891 400 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 PHKA2P46019 1235 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 DUOXA2Q1HG44 320 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 CLEC16AQ2KHT3 1053 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF677Q86XU0 584 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 GSPT2Q8IYD1 628 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 TINF2Q9BSI4 451 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 ABHD16BQ9H3Z7 469 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 MINDY3Q9H8M7 445 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 PTPRHQ9HD43 1115 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 CHORDC1Q9UHD1 332 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 TMEM59LQ9UK28 342 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 NOC2LQ9Y3T9 749 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 NUB1Q9Y5A7 615 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 TMEM110-MUSTN1A8MSY1 372 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 H3BRB1 525 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 DDX3YO15523 660 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 MYBL2P10244 700 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 SMPD1P17405 629 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 TMOD1P28289 359 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 DUSP28Q4G0W2 176 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 KLHL7Q8IXQ5 586 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 RASGEF1CQ8N431 466 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 C16orf70Q9BSU1 422 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 NUP85Q9BW27 656 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 NFKBIZQ9BYH8 718 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 MTMR12Q9C0I1 747 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 PRMT7Q9NVM4 692 aaPredicted RBP16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 AKT3Q9Y243 479 aa16.47■□□□□ 0.23
RPUSD3-215ENST00000475470 CYP1A2P05177 515 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 ACO1P21399 889 aaKnown RBP16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 OSTNP61366 133 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 GPS2Q13227 327 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 MESDQ14696 234 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 TMEM270Q6UE05 265 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 CDR2LQ86X02 465 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 ZNF564Q8TBZ8 553 aaPredicted RBP16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 AP1M1Q9BXS5 423 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 COL1A2P08123 1366 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 SLC15A5A6NIM6 579 aa16.46■□□□□ 0.23
RPUSD3-215ENST00000475470 KRIT1O00522 736 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms