RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 B4GALT4O60513 344 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 NMT2O60551 498 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 YEATS4O95619 227 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 EYA4O95677 639 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 SYF2O95926 243 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 FOSP01100 380 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 GSTT2P0CG29 244 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 GSTT2BP0CG30 244 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 CYP2C9P11712 490 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 KCNA6P17658 529 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 FUT4P22083 530 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 SSTR4P31391 388 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 LIFRP42702 1097 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 TUFMP49411 452 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 ELF3P78545 371 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 SLFN5Q08AF3 891 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 TRAP1Q12931 704 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 LSAMPQ13449 338 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 PKP1Q13835 747 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 MBTPS1Q14703 1052 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 TMTC4Q5T4D3 741 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 E4F1Q66K89 784 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 PSAPL1Q6NUJ1 521 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 C6orf89Q6UWU4 347 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 TAOK1Q7L7X3 1001 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 C14orf80Q86SX3 495 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 VPS36Q86VN1 386 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 RHOT2Q8IXI1 618 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 DZIP1LQ8IYY4 767 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 PTPRN2Q92932 1015 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 LENG1Q96BZ8 264 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 ACSF2Q96CM8 615 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 GIMAP5Q96F15 307 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 MAELQ96JY0 434 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 HAPLN3Q96S86 360 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 NUF2Q9BZD4 464 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 ASPSCR1Q9BZE9 553 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 KLHL4Q9C0H6 718 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 NDEL1Q9GZM8 345 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 C12orf10Q9HB07 376 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 CASS4Q9NQ75 786 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 PFDN4Q9NQP4 134 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 RRP7BPQ9NSQ0 103 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 SEPT11Q9NVA2 429 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 FRRS1LQ9P0K9 344 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 CRNNQ9UBG3 495 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 SUSD2Q9UGT4 822 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 ADAM30Q9UKF2 790 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 KIAA1257Q9ULG3 409 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 NR2E3Q9Y5X4 410 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 POLR3AO14802 1390 aaPredicted RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 NSD2O96028 1365 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 ABCC3O15438 1527 aa6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 RNF17Q9BXT8 1623 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-215ENST00000475319 AP3B1O00203 1094 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 PSMD14O00487 310 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 RNASEH2AO75792 299 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 TP53P04637 393 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 EPB41P11171 864 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 PRKACBP22694 351 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 SP100P23497 879 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 GNALP38405 381 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 SKIV2L2P42285 1042 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 CENPAP49450 140 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 KPNA1P52294 538 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 THOP1P52888 689 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 GP2P55259 537 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 UBASH3AP57075 661 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 PPP2R2AP63151 447 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 KRT83P78385 493 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 CYP4A11Q02928 519 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 MCL1Q07820 350 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 NIPAL4Q0D2K0 466 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 C19orf57Q0VDD7 668 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 LAPTM5Q13571 262 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 NFE2L1Q14494 772 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ARL13BQ3SXY8 428 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ANKDD1AQ495B1 522 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ANKRD20A8PQ5CZ79 823 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 CEP78Q5JTW2 689 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 TCERG1LQ5VWI1 586 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 TDRD10Q5VZ19 366 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ALS2CLQ60I27 953 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 LMBRD2Q68DH5 695 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 KRT27Q7Z3Y8 459 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 HDGFL2Q7Z4V5 671 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 MAP7D3Q8IWC1 876 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 SCUBE1Q8IWY4 988 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 RIN3Q8TB24 985 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ARHGEF2Q92974 986 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 ANKRD36BP1Q96IX9 119 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 PAWRQ96IZ0 340 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 SLC6A18Q96N87 628 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 AIFM2Q9BRQ8 373 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 AARSD1Q9BTE6 412 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 HGH1Q9BTY7 390 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 LGR4Q9BXB1 951 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 MRPL4Q9BYD3 311 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 GBA3Q9H227 469 aa6.4□□□□□ -1.38
ECHDC1-215ENST00000475319 SERHL2Q9H4I8 314 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms