RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 PIN4Q9Y237 131 aaKnown RBP22.02■■□□□ 1.12
CDHR3-210ENST00000474330 PTPRJQ12913 1337 aa22.02■■□□□ 1.12
CDHR3-210ENST00000474330 CITO14578 2027 aa22.02■■□□□ 1.12
CDHR3-210ENST00000474330 NPTXRO95502 500 aa22.02■■□□□ 1.11
CDHR3-210ENST00000474330 TSR1Q2NL82 804 aaKnown RBP22.02■■□□□ 1.11
CDHR3-210ENST00000474330 FBXL13Q8NEE6 735 aa22.02■■□□□ 1.11
CDHR3-210ENST00000474330 UBE2OQ9C0C9 1292 aaKnown RBP22.02■■□□□ 1.11
CDHR3-210ENST00000474330 NUCKS1Q9H1E3 243 aaKnown RBP22.02■■□□□ 1.11
CDHR3-210ENST00000474330 NLRC4Q9NPP4 1024 aa22.02■■□□□ 1.11
CDHR3-210ENST00000474330 TBX21Q9UL17 535 aa22.02■■□□□ 1.11
CDHR3-210ENST00000474330 SQORQ9Y6N5 450 aa22.02■■□□□ 1.11
CDHR3-210ENST00000474330 CXCL8P10145 99 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 HNRNPH3P31942 346 aaKnown RBP22.01■■□□□ 1.11
CDHR3-210ENST00000474330 LMBRD2Q68DH5 695 aaPredicted RBP22.01■■□□□ 1.11
CDHR3-210ENST00000474330 FAM212AQ96EL1 285 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 ACAP3Q96P50 834 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 LBHD1Q9BQE6 289 aaPredicted RBP22.01■■□□□ 1.11
CDHR3-210ENST00000474330 ASB7Q9H672 318 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 RAB20Q9NX57 234 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 APEX2Q9UBZ4 518 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 PYCARDQ9ULZ3 195 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 ST3GAL5Q9UNP4 418 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 PLAGL2Q9UPG8 496 aa22.01■■□□□ 1.11
CDHR3-210ENST00000474330 TANC1Q9C0D5 1861 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 GPR182O15218 404 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 MEA1Q16626 185 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 SLC10A6Q3KNW5 377 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 FBXO47Q5MNV8 452 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 PDXDC1Q6P996 788 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 RRAGAQ7L523 313 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 CAGE1Q8TC20 777 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 TAS1R2Q8TE23 839 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 SEMA4DQ92854 862 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 CCDC94Q9BW85 323 aaPredicted RBP22■■□□□ 1.11
CDHR3-210ENST00000474330 EIF2AQ9BY44 585 aaKnown RBP22■■□□□ 1.11
CDHR3-210ENST00000474330 CHST12Q9NRB3 414 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 FHOD1Q9Y613 1164 aa22■■□□□ 1.11
CDHR3-210ENST00000474330 LRRC53A6NM62 1247 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 ARHGAP6O43182 974 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 CKBP12277 381 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 RFX1P22670 979 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 UBXN11Q5T124 520 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 ZNF618Q5T7W0 954 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 TDRD10Q5VZ19 366 aaKnown RBP21.99■■□□□ 1.11
CDHR3-210ENST00000474330 PHLDB3Q6NSJ2 640 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 USP38Q8NB14 1042 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 OR5B17Q8NGF7 314 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 SYN2Q92777 582 aaPredicted RBP21.99■■□□□ 1.11
CDHR3-210ENST00000474330 MYO6Q9UM54 1294 aa21.99■■□□□ 1.11
CDHR3-210ENST00000474330 LACTBL1A8MY62 500 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 ESPNB1AK53 854 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 MEFVO15553 781 aaPredicted RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 LRRN2O75325 713 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 KCNJ6P48051 423 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 DUOXA2Q1HG44 320 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 IQCEQ6IPM2 695 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 WDR59Q6PJI9 974 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 TMTC1Q8IUR5 882 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 CD302Q8IX05 232 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 TDHQ8IZJ6 230 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 KIAA1524Q8TCG1 905 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 TRIM6Q9C030 488 aaPredicted RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 AGO3Q9H9G7 860 aaKnown RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 ERVK-5Q9HDB9 667 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 ZNHIT6Q9NWK9 470 aaKnown RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 RALGAPA2Q2PPJ7 1873 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 ZC3H11AO75152 810 aaKnown RBP eCLIP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 TIMP1P01033 207 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 RAG1P15918 1043 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 MSNP26038 577 aaKnown RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 CDK17Q00537 523 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 NFX1Q12986 1120 aaKnown RBP21.98■■□□□ 1.11
CDHR3-210ENST00000474330 BIRC3Q13489 604 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 BFSP2Q13515 415 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 GJB7Q6PEY0 223 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 CYP26C1Q6V0L0 522 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 EFCAB13Q8IY85 973 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 FAM84AQ96KN4 292 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 PLEKHA5Q9HAU0 1116 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 DNAJC12Q9UKB3 198 aa21.98■■□□□ 1.11
CDHR3-210ENST00000474330 VNN1O95497 513 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 GHRP10912 638 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 EPHB4P54760 987 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 LPIN1Q14693 890 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 TRAF7Q6Q0C0 670 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 SPAG5Q96R06 1193 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 STK33Q9BYT3 514 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 OSBPL7Q9BZF2 842 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 SNTG2Q9NY99 539 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 AJAP1Q9UKB5 411 aaPredicted RBP21.97■■□□□ 1.11
CDHR3-210ENST00000474330 PADI3Q9ULW8 664 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 TRIP11Q15643 1979 aa21.97■■□□□ 1.11
CDHR3-210ENST00000474330 SOX1O00570 391 aaPredicted RBP21.96■■□□□ 1.11
CDHR3-210ENST00000474330 HLA-DRAP01903 254 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 JAM2P57087 298 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 E4F1Q66K89 784 aaPredicted RBP21.96■■□□□ 1.11
CDHR3-210ENST00000474330 TWF2Q6IBS0 349 aaKnown RBP21.96■■□□□ 1.11
CDHR3-210ENST00000474330 TRAPPC11Q7Z392 1133 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 NT5DC4Q86YG4 428 aa21.96■■□□□ 1.11
CDHR3-210ENST00000474330 ANKRD36BP1Q96IX9 119 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms