RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	IBSP	P21815	317 aa	Predicted RBP	4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SLC6A2	P23975	617 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CRHR1	P34998	444 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MXRA7	P84157	204 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	UGT8	Q16880	541 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SPDYE7P	Q495Y7	208 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ATP13A4	Q4VNC1	1196 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272		Q6ZNX1	250 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272		Q6ZVL8	140 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	DDX46	Q7L014	1031 aa	Known RBP	4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RASSF3	Q86WH2	238 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	DDX42	Q86XP3	938 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CMIP	Q8IY22	773 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	INO80B	Q9C086	356 aa	Predicted RBP	4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	LDAH	Q9H6V9	325 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ATP8A1	Q9Y2Q0	1164 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	NOX1	Q9Y5S8	564 aa		4.93	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ATRNL1	Q5VV63	1379 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272		A0A1B0GTW7	788 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MYADML2	A6NDP7	307 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	NEMP1	O14524	444 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	C1R	P00736	705 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	BPI	P17213	487 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ID4	P47928	161 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	IGBP1	P78318	339 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	BLOC1S1	P78537	153 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	HSD11B2	P80365	405 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MST1L	Q2TV78	715 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RRP12	Q5JTH9	1297 aa	Known RBP	4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	LHFPL2	Q6ZUX7	228 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ANKRD13A	Q8IZ07	590 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PRPF38A	Q8NAV1	312 aa	Known RBP	4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	NACC2	Q96BF6	587 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MRI1	Q9BV20	369 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CASS4	Q9NQ75	786 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	IL17RB	Q9NRM6	502 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	USP25	Q9UHP3	1055 aa		4.92	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PJA2	O43164	708 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	C1QL1	O75973	258 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SNRPA1	P09661	255 aa	Known RBP	4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RAP2A	P10114	183 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ALOX15	P16050	662 aa	Predicted RBP	4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CDK11B	P21127	795 aa	Known RBP	4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FGFR4	P22455	802 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	RARRES1	P49788	294 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ANAPC15	P60006	121 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	CXADR	P78310	365 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	STAT4	Q14765	748 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	AFMID	Q63HM1	303 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	TGFBRAP1	Q8WUH2	860 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MYOC	Q99972	504 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	FOXJ2	Q9P0K8	574 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	MCM8	Q9UJA3	840 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	SIK3	Q9Y2K2	1263 aa		4.91	□□□□□ -1.62
TMEM50B-208	ENST00000474272	PPM1G	O15355	546 aa	Predicted RBP	4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ERBB2	P04626	1255 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	EVA1C	P58658	441 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	EPHA10	Q5JZY3	1008 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	OR7D4	Q8NG98	312 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	STAG1	Q8WVM7	1258 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	NELL1	Q92832	810 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	USP7	Q93009	1102 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FUBP3	Q96I24	572 aa	Known RBP eCLIP	4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	UHRF1	Q96T88	793 aa	Predicted RBP	4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	AIFM2	Q9BRQ8	373 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	KLK15	Q9H2R5	256 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	IFT22	Q9H7X7	185 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	DMRT3	Q9NQL9	472 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TBCCD1	Q9NVR7	557 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RNF7	Q9UBF6	113 aa		4.9	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GPR39	O43194	453 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PHF2	O75151	1096 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	RBMXL2	O75526	392 aa	Known RBP	4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FPR1	P21462	350 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SREBF1	P36956	1147 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ABCG1	P45844	678 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FOXF2	Q12947	444 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	UBXN2B	Q14CS0	331 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FSCN1	Q16658	493 aa	Known RBP	4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ARMC6	Q6NXE6	501 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	CLRN3	Q8NCR9	226 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GPR156	Q8NFN8	814 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ATL2	Q8NHH9	583 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TSPEAR	Q8WU66	669 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SLC9A6	Q92581	669 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	PTCD3	Q96EY7	689 aa	Known RBP	4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	TTC1	Q99614	292 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	SEMA4G	Q9NTN9	838 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	FBXO34	Q9NWN3	711 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ASB6	Q9NWX5	421 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	LRIT1	Q9P2V4	623 aa		4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	APOBEC2	Q9Y235	224 aa	Known RBP	4.89	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ZEB2	O60315	1214 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	BRINP1	O60477	761 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	GPANK1	O95872	356 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	POMC	P01189	267 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	CPE	P16870	476 aa		4.88	□□□□□ -1.63
TMEM50B-208	ENST00000474272	ENPP1	P22413	925 aa		4.88	□□□□□ -1.63

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