RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 EPM2AIP1Q7L775 607 aaPredicted RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 GLIS3Q8NEA6 775 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 BEST2Q8NFU1 509 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 GOLGA5Q8TBA6 731 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 BCL7CQ8WUZ0 217 aaPredicted RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 SCFD1Q8WVM8 642 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 GBP4Q96PP9 640 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 EMILIN2Q9BXX0 1053 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 CXCL16Q9H2A7 254 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 IKZF4Q9H2S9 585 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 PCIF1Q9H4Z3 704 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 ASB7Q9H672 318 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 KIAA1586Q9HCI6 787 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 MARCH5Q9NX47 278 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 CGNQ9P2M7 1197 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 THEGQ9P2T0 379 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 UBQLN1Q9UMX0 589 aaKnown RBP14.95□□□□□ -0.02
USF1-205ENST00000473969 NUB1Q9Y5A7 615 aa14.95□□□□□ -0.02
USF1-205ENST00000473969 KIAA1671Q9BY89 1806 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 TTC26A0AVF1 554 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 PODXLO00592 558 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 EXTL3O43909 919 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 GADD45BO75293 160 aaPredicted RBP14.94□□□□□ -0.02
USF1-205ENST00000473969 RHOBTB3O94955 611 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 IL18RAPO95256 599 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 ADSSP30520 456 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 CLCNKBP51801 687 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 SPAG1Q07617 926 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 STK4Q13043 487 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 PNOCQ13519 176 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 SNW1Q13573 536 aaKnown RBP14.94□□□□□ -0.02
USF1-205ENST00000473969 KCNB1Q14721 858 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 USP41Q3LFD5 358 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 ZBTB41Q5SVQ8 909 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 GPD1LQ8N335 351 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 MRPL43Q8N983 215 aaKnown RBP14.94□□□□□ -0.02
USF1-205ENST00000473969 ENGASEQ8NFI3 743 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 HASPINQ8TF76 798 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 SMARCE1Q969G3 411 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 SAAL1Q96ER3 474 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 ZMAT2Q96NC0 199 aaKnown RBP14.94□□□□□ -0.02
USF1-205ENST00000473969 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 HERC2P3Q9BVR0 1158 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 GTPBP4Q9BZE4 634 aaKnown RBP14.94□□□□□ -0.02
USF1-205ENST00000473969 ZBP1Q9H171 429 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 GOLGA2P5Q9HBQ8 144 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 CLDND1Q9NY35 253 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 A0A0C4DFX4 3053 aa14.94□□□□□ -0.02
USF1-205ENST00000473969 PRRC2BQ5JSZ5 2229 aaKnown RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 GOLGA8IPA6NC78 632 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 C2orf71A6NGG8 1288 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 ZNF233A6NK53 670 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 GOLGA8JA6NMD2 632 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 GOLGA6L22H0YM25 854 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 C2CD2LO14523 706 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 PER2O15055 1255 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 FAM189A1O60320 539 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 KIF4AO95239 1232 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 CYP3A5P20815 502 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 GLUD2P49448 558 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 NDUFV1P49821 464 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 HYAL1Q12794 435 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 TMEM132DQ14C87 1099 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 NAB2Q15742 525 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 UPP1Q16831 310 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 BMT2Q1RMZ1 405 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 JADE1Q6IE81 842 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 ADGRD2Q7Z7M1 963 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 CEP57Q86XR8 500 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 CACTINQ8WUQ7 758 aaKnown RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 C18orf25Q96B23 403 aaPredicted RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 PABPC5Q96DU9 382 aaKnown RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 GSDMAQ96QA5 445 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 PAAF1Q9BRP4 392 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 AGPAT3Q9NRZ7 376 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 RBAKQ9NYW8 714 aaPredicted RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 HSPBP1Q9NZL4 362 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 CACNG4Q9UBN1 327 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 DERAQ9Y315 318 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 R3HCC1Q9Y3T6 440 aaKnown RBP14.93□□□□□ -0.02
USF1-205ENST00000473969 PCDHGC5Q9Y5F6 944 aa14.93□□□□□ -0.02
USF1-205ENST00000473969 HIDE1A8MVS5 230 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 TMEM189-UBE2V1I3L0A0 370 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 CLIC2O15247 247 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 CALUO43852 315 aaPredicted RBP14.92□□□□□ -0.02
USF1-205ENST00000473969 CYP2J2P51589 502 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 MRPS5P82675 430 aaKnown RBP14.92□□□□□ -0.02
USF1-205ENST00000473969 CREMQ03060 361 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 SURF1Q15526 300 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 DUSP6Q16828 381 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 FAM171A1Q5VUB5 890 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 PDXDC1Q6P996 788 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 PPFIBP1Q86W92 1011 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 NT5DC4Q86YG4 428 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.92□□□□□ -0.02
USF1-205ENST00000473969 ELOA2Q8IYF1 753 aaPredicted RBP14.92□□□□□ -0.02
USF1-205ENST00000473969 EFHBQ8N7U6 833 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 XXYLT1Q8NBI6 393 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 KIAA0895Q8NCT3 520 aa14.92□□□□□ -0.02
USF1-205ENST00000473969 ATXN2LQ8WWM7 1075 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms