RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 LLGL2Q6P1M3 1020 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 MPZL3Q6UWV2 235 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 SCARA5Q6ZMJ2 495 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 TSHZ1Q6ZSZ6 1077 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 USP37Q86T82 979 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 PDCL2Q8N4E4 241 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 CAGE1Q8TC20 777 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 C2orf40Q9H1Z8 148 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 KIAA1586Q9HCI6 787 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 PTPRHQ9HD43 1115 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 LUC7LQ9NQ29 371 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 SLC5A4Q9NY91 659 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 CPSF3Q9UKF6 684 aaKnown RBP6.71□□□□□ -1.34
CLK1-210ENST00000473565 SNX12Q9UMY4 172 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 JRKLQ9Y4A0 524 aa6.71□□□□□ -1.34
CLK1-210ENST00000473565 TRIP11Q15643 1979 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 ZNF236Q9UL36 1845 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 A6NJR5 290 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PMM2O15305 246 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 LDHAP00338 332 aaKnown RBP6.7□□□□□ -1.34
CLK1-210ENST00000473565 FTLP02792 175 aaPredicted RBP6.7□□□□□ -1.34
CLK1-210ENST00000473565 NFICP08651 508 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 HOXC6P09630 235 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CYP11B1P15538 503 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CD58P19256 250 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PROZP22891 400 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 GTF2H1P32780 548 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 RGS2P41220 211 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PSMC4P43686 418 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PHKA2P46019 1235 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 MCCD1P59942 119 aaPredicted RBP6.7□□□□□ -1.34
CLK1-210ENST00000473565 NOP14P78316 857 aaKnown RBP6.7□□□□□ -1.34
CLK1-210ENST00000473565 FMO1Q01740 532 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 C2orf54Q08AI8 447 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CPNE8Q86YQ8 564 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PASD1Q8IV76 773 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 GOLGA1Q92805 767 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 OSBPL9Q96SU4 736 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 OSMRQ99650 979 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PLEKHA4Q9H4M7 779 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PDZD7Q9H5P4 517 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PPME1Q9Y570 386 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CTAGE15A4D2H0 777 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 MAGEB2O15479 319 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 SEC31AO94979 1220 aaKnown RBP6.7□□□□□ -1.34
CLK1-210ENST00000473565 CTAGE8P0CG41 777 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 RFX1P22670 979 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 ABCD1P33897 745 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 MFSD10Q14728 455 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 WHAMMP3Q1A5X7 153 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 WDR44Q5JSH3 913 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CTAGE6Q86UF2 777 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CREG2Q8IUH2 290 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 CTAGE4Q8IX94 777 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 SLC35G2Q8TBE7 412 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 MAP7D2Q96T17 732 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 PNKPQ96T60 521 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 APBA2Q99767 749 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 COG5Q9UP83 839 aa6.7□□□□□ -1.34
CLK1-210ENST00000473565 ANO9A1A5B4 782 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TREHO43280 583 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TSPAN1O60635 241 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 ZMYND10O75800 440 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PGK1P00558 417 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 F2P00734 622 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 KRT19P08727 400 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 C6orf222P0C671 652 aaPredicted RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 CYP2C9P11712 490 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 HOXD8P13378 290 aaPredicted RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 TMOD1P28289 359 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 FLT3LGP49771 235 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 ORC1Q13415 861 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 CUL2Q13617 745 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TMEM270Q6UE05 265 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 EXOC8Q8IYI6 725 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 RNF10Q8N5U6 811 aaKnown RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 CEP112Q8N8E3 955 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TPCN2Q8NHX9 752 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 DNAJB3Q8WWF6 145 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TRIB2Q92519 343 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 KCNN1Q92952 543 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 BTBD6Q96KE9 485 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 ANKZF1Q9H8Y5 726 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PRMT7Q9NVM4 692 aaPredicted RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 HES2Q9Y543 173 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PCDHB4Q9Y5E5 795 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PCDHGC5Q9Y5F6 944 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 TMEM110-MUSTN1A8MSY1 372 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 LACTBL1A8MY62 500 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 KIAA0391O15091 583 aaKnown RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 ASAP2O43150 1006 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 BUB1BO60566 1050 aaPredicted RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 WEE2P0C1S8 567 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 STAG3L1P0CL83 205 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 ACO1P21399 889 aaKnown RBP6.69□□□□□ -1.34
CLK1-210ENST00000473565 RAP1GAPP47736 663 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PDE6CP51160 858 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 CLCN6P51797 869 aa6.69□□□□□ -1.34
CLK1-210ENST00000473565 PRKCZQ05513 592 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms