RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 UBE2ZQ9H832 354 aaPredicted RBP19.27■□□□□ 0.68
RPUSD3-214ENST00000473522 RPF1Q9H9Y2 349 aaKnown RBP19.27■□□□□ 0.68
RPUSD3-214ENST00000473522 THEGQ9P2T0 379 aa19.27■□□□□ 0.68
RPUSD3-214ENST00000473522 SPTBN5Q9NRC6 3674 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 FSD2A1L4K1 749 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 CASTOR2A6NHX0 329 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 KIAA0391O15091 583 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 TGFB1I1O43294 461 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 LDHAP00338 332 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 CYP3A5P20815 502 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 NRIP1P48552 1158 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 ACOT2P49753 483 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 CLCNKBP51801 687 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 FAM160A1Q05DH4 1040 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 STK4Q13043 487 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 KMT5BQ4FZB7 885 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 PLPP4Q5VZY2 271 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 RBM23Q86U06 439 aaKnown RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 ELOA2Q8IYF1 753 aaPredicted RBP19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 RABGGTAQ92696 567 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 TIGD1Q96MW7 591 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 HERC2P3Q9BVR0 1158 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 SLC39A2Q9NP94 309 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 SSX2IPQ9Y2D8 614 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 RALGAPA2Q2PPJ7 1873 aa19.26■□□□□ 0.67
RPUSD3-214ENST00000473522 MYH15Q9Y2K3 1946 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 PER2O15055 1255 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 RHOBTB3O94955 611 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 RPN1P04843 607 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 MRPS5P82675 430 aaKnown RBP19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 DSG1Q02413 1049 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 PTPN14Q15678 1187 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 AAK1Q2M2I8 961 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 TPRNQ4KMQ1 711 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 FUT10Q6P4F1 479 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 C18orf25Q96B23 403 aaPredicted RBP19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 CCDC34Q96HJ3 373 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 ASB2Q96Q27 587 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 IGFLR1Q9H665 355 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 RXFP1Q9HBX9 757 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 CACNG4Q9UBN1 327 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 DERAQ9Y315 318 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 UBE4BO95155 1302 aa19.25■□□□□ 0.67
RPUSD3-214ENST00000473522 XIRP2A4UGR9 3374 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 B3GAT3O94766 335 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 CSPG5O95196 566 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 KIF4AO95239 1232 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 PRR29P0C7W0 189 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 IGFBP6P24592 240 aaPredicted RBP19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 LRPAP1P30533 357 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 PPP2R3AQ06190 1150 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 KCNB1Q14721 858 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 USP41Q3LFD5 358 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 LEXMQ3ZCV2 418 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 CLEC17AQ6ZS10 378 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 TMEM174Q8WUU8 243 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 CBWD1Q9BRT8 395 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 GOLGA2P5Q9HBQ8 144 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 MRPL17Q9NRX2 175 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 UBQLN1Q9UMX0 589 aaKnown RBP19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 A0A0C4DFX4 3053 aa19.24■□□□□ 0.67
RPUSD3-214ENST00000473522 LINC01565O15544 149 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 EXTL3O43909 919 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 CLASP2O75122 1294 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 GADD45BO75293 160 aaPredicted RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 TFF2Q03403 129 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 ELAVL2Q12926 359 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 KNOP1Q1ED39 458 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 SPATA1Q5VX52 437 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 KIAA0895Q8NCT3 520 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 SPATA20Q8TB22 786 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 AUTS2Q8WXX7 1259 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 FBXL18Q96ME1 805 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 KLHL5Q96PQ7 755 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 FAM213AQ9BRX8 229 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 EXOC1Q9NV70 894 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 CLDND1Q9NY35 253 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 CLEC1BQ9P126 229 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 CGNQ9P2M7 1197 aaKnown RBP19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 C2CD2Q9Y426 696 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 REV3LO60673 3130 aa19.23■□□□□ 0.67
RPUSD3-214ENST00000473522 SF3B1O75533 1304 aaKnown RBP eCLIP19.23■□□□□ 0.671e-6■■■■■ 66.8
RPUSD3-214ENST00000473522 PODXLO00592 558 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 GLP2RO95838 553 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 C1RP00736 705 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 BMP1P13497 986 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 GLUD2P49448 558 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 SPAG1Q07617 926 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 DLX2Q07687 328 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 C3orf58Q8NDZ4 430 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 ZSWIM2Q8NEG5 633 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 VN1R2Q8NFZ6 395 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 KIF12Q96FN5 646 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 MSLNLQ96KJ4 702 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 EMILIN2Q9BXX0 1053 aa19.22■□□□□ 0.67
RPUSD3-214ENST00000473522 KIAA1586Q9HCI6 787 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms