RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 CREMQ03060 361 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 RAB33AQ14088 237 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 SLC44A4Q53GD3 710 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 ATF7IP2Q5U623 682 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 GPR65Q8IYL9 337 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 C18orf25Q96B23 403 aaPredicted RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 TCEAL4Q96EI5 215 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 DDX27Q96GQ7 796 aaKnown RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 ZMAT2Q96NC0 199 aaKnown RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 HINFPQ9BQA5 517 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 C2orf40Q9H1Z8 148 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 SPATA6Q9NWH7 488 aaPredicted RBP12.34□□□□□ -0.43
ACTB-209ENST00000473257 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 F5P12259 2224 aa12.34□□□□□ -0.43
ACTB-209ENST00000473257 ZMYM2Q9UBW7 1377 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 SMIM28A0A1B0GU29 152 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 FAM170BA6NMN3 283 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 XYLBO75191 536 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 RPA1P27694 616 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 CDC25AP30304 524 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 STARD6P59095 220 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 MLF2Q15773 248 aaPredicted RBP12.33□□□□□ -0.44
ACTB-209ENST00000473257 PABPC1LQ4VXU2 614 aaKnown RBP12.33□□□□□ -0.44
ACTB-209ENST00000473257 SEZ6Q53EL9 994 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 TTC38Q5R3I4 469 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 TSSK4Q6SA08 328 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.33□□□□□ -0.44
ACTB-209ENST00000473257 TAS1R3Q7RTX0 852 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 DAW1Q8N136 415 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 C4orf32Q8N8J7 132 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 C8orf76Q96K31 380 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 ADPGKQ9BRR6 497 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 TARS2Q9BW92 718 aaKnown RBP12.33□□□□□ -0.44
ACTB-209ENST00000473257 CDT1Q9H211 546 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 DDX19AQ9NUU7 478 aaKnown RBP12.33□□□□□ -0.44
ACTB-209ENST00000473257 KIAA1024Q9UPX6 916 aa12.33□□□□□ -0.44
ACTB-209ENST00000473257 EPG5Q9HCE0 2579 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 TPRP12270 2363 aaKnown RBP12.32□□□□□ -0.44
ACTB-209ENST00000473257 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 CCDC169A6NNP5 214 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 SFI1A8K8P3 1242 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 E9PMD0 336 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 SEC24AO95486 1093 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 C1RP00736 705 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 RHOP08100 348 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 CDR1P51861 262 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 PEX3P56589 373 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 CSTF1Q05048 431 aaKnown RBP12.32□□□□□ -0.44
ACTB-209ENST00000473257 GRM2Q14416 872 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 SAFBQ15424 915 aaKnown RBP eCLIP12.32□□□□□ -0.44
ACTB-209ENST00000473257 IL17AQ16552 155 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 UPP1Q16831 310 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 DCAF4L1Q3SXM0 396 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 TANGO2Q6ICL3 276 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 TPRG1Q6ZUI0 275 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 KCNK18Q7Z418 384 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 GPIHBP1Q8IV16 184 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 ZBTB45Q96K62 511 aaPredicted RBP12.32□□□□□ -0.44
ACTB-209ENST00000473257 IFT74Q96LB3 600 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 RUSC1Q9BVN2 902 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 MRPS23Q9Y3D9 190 aaKnown RBP12.32□□□□□ -0.44
ACTB-209ENST00000473257 MIA3Q5JRA6 1907 aa12.32□□□□□ -0.44
ACTB-209ENST00000473257 WDR27A2RRH5 827 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 SHISA7A6NL88 538 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 PODXLO00592 558 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 HIP1RO75146 1068 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 GJA1P17302 382 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 TARSP26639 723 aaKnown RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 HOXA9P31269 272 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 CCR2P41597 374 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 NPTX2P47972 431 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 TOB1P50616 345 aaPredicted RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 ROR1Q01973 937 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 SPAG1Q07617 926 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 RAD51AP2Q09MP3 1159 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 ELAVL2Q12926 359 aaKnown RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 ZNF568Q3ZCX4 644 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 VARS2Q5ST30 1063 aaKnown RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 HS6ST3Q8IZP7 471 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 SUMF1Q8NBK3 374 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 ERMNQ8TAM6 284 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 ZSWIM3Q96MP5 696 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 ACO2Q99798 780 aaKnown RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 CORO1BQ9BR76 489 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 DDX23Q9BUQ8 820 aaKnown RBP12.31□□□□□ -0.44
ACTB-209ENST00000473257 LTB4R2Q9NPC1 389 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 HEBP1Q9NRV9 189 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 LRWD1Q9UFC0 647 aa12.31□□□□□ -0.44
ACTB-209ENST00000473257 FANCMQ8IYD8 2048 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 K7ERI5 159 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 PRRG1O14668 218 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 SLC16A4O15374 487 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 FCARP24071 287 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 MAPK7Q13164 816 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 ZRSR1Q15695 479 aaKnown RBP12.3□□□□□ -0.44
ACTB-209ENST00000473257 ALKAL1Q6UXT8 129 aa12.3□□□□□ -0.44
ACTB-209ENST00000473257 MTSS1LQ765P7 747 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms