RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 FAM160A1Q05DH4 1040 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 SPAG1Q07617 926 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 GRIK3Q13003 919 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 PNOCQ13519 176 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 CTC1Q2NKJ3 1217 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 TAS1R1Q7RTX1 841 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 ADGRD2Q7Z7M1 963 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 HACE1Q8IYU2 909 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 RSPH1Q8WYR4 309 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 C18orf25Q96B23 403 aaPredicted RBP14.31□□□□□ -0.12
TPM3-216ENST00000473036 ACAP3Q96P50 834 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 ACCSQ96QU6 501 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 CBWD1Q9BRT8 395 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 TMEM175Q9BSA9 504 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 MSTO1Q9BUK6 570 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 GOLGA2P5Q9HBQ8 144 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 AAASQ9NRG9 546 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 SPG21Q9NZD8 308 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 CNTN3Q9P232 1028 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 CPSF3Q9UKF6 684 aaKnown RBP14.31□□□□□ -0.12
TPM3-216ENST00000473036 PRG3Q9Y2Y8 225 aaPredicted RBP14.31□□□□□ -0.12
TPM3-216ENST00000473036 PCDHB13Q9Y5F0 798 aa14.31□□□□□ -0.12
TPM3-216ENST00000473036 TRIOO75962 3097 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 CASTOR2A6NHX0 329 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 LACTBL1A8MY62 500 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 H3BQ06 376 aaPredicted RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 OGTO15294 1046 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 RPN1P04843 607 aaKnown RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 KCNE1P15382 129 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 OR1G1P47890 313 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 ALDH7A1P49419 539 aaKnown RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 SMAD2Q15796 467 aaKnown RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 BMT2Q1RMZ1 405 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 TCEAL5Q5H9L2 206 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 SCARA3Q6AZY7 606 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 RNF168Q8IYW5 571 aaPredicted RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 C3orf58Q8NDZ4 430 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 FAM84AQ96KN4 292 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 FBXL18Q96ME1 805 aa14.3□□□□□ -0.12
TPM3-216ENST00000473036 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
TPM3-216ENST00000473036 HIDE1A8MVS5 230 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 EIF3DO15371 548 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM3-216ENST00000473036 PRPF40AO75400 957 aaKnown RBP14.29□□□□□ -0.12
TPM3-216ENST00000473036 ALDH2P05091 517 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 MYL1P05976 194 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 THP07101 528 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 CLTAP09496 248 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 MATR3P43243 847 aaKnown RBP eCLIP14.29□□□□□ -0.12
TPM3-216ENST00000473036 ALCAMQ13740 583 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 POSTNQ15063 836 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 ZBTB6Q15916 424 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 BMP8AQ7Z5Y6 402 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 NELFCDQ8IXH7 590 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 AUTS2Q8WXX7 1259 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 SAAL1Q96ER3 474 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 RPS6KC1Q96S38 1066 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 PCIF1Q9H4Z3 704 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 TUBGCP4Q9UGJ1 667 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 AGO2Q9UKV8 859 aaKnown RBP14.29□□□□□ -0.12
TPM3-216ENST00000473036 LZTS1Q9Y250 596 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
TPM3-216ENST00000473036 GOLGA8IPA6NC78 632 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 GOLGA8JA6NMD2 632 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 RHOBTB3O94955 611 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 KIF4AO95239 1232 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 ABCD1P33897 745 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 SCN1AP35498 2009 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 PPM1AP35813 382 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 CLCNKBP51801 687 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 GUCY2FP51841 1108 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 RBM10P98175 930 aaKnown RBP14.28□□□□□ -0.12
TPM3-216ENST00000473036 UBE3AQ05086 875 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 HYAL1Q12794 435 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 TUSC3Q13454 348 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 DDX53Q86TM3 631 aaKnown RBP14.28□□□□□ -0.12
TPM3-216ENST00000473036 SMYD4Q8IYR2 804 aaPredicted RBP14.28□□□□□ -0.12
TPM3-216ENST00000473036 SPATA20Q8TB22 786 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 HASPINQ8TF76 798 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 POMGNT1Q8WZA1 660 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 PPP2R3CQ969Q6 453 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 B3GALT6Q96L58 329 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 TIGD1Q96MW7 591 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
TPM3-216ENST00000473036 GPR62Q9BZJ7 368 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 ZBP1Q9H171 429 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 KCTD10Q9H3F6 313 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 TLR9Q9NR96 1032 aa14.28□□□□□ -0.12
TPM3-216ENST00000473036 ZNF318Q5VUA4 2279 aa14.27□□□□□ -0.12
TPM3-216ENST00000473036 CLIC2O15247 247 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 LINC01565O15544 149 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 LILRB3O75022 631 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 GARTP22102 1010 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
TPM3-216ENST00000473036 SMAD4Q13485 552 aaKnown RBP14.27□□□□□ -0.13
TPM3-216ENST00000473036 HSP90AA2PQ14568 343 aaPredicted RBP14.27□□□□□ -0.13
TPM3-216ENST00000473036 UPP1Q16831 310 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 PLPP4Q5VZY2 271 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 SLFN12LQ6IEE8 588 aa14.27□□□□□ -0.13
TPM3-216ENST00000473036 APBB1IPQ7Z5R6 666 aaPredicted RBP14.27□□□□□ -0.13
TPM3-216ENST00000473036 EFCAB13Q8IY85 973 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms