RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 MYBPC2Q14324 1141 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 ZBTB6Q15916 424 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 DDX53Q86TM3 631 aaKnown RBP22.58■■□□□ 1.21
TOP3A-204ENST00000472959 SLC9A9Q8IVB4 645 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 BRSK2Q8IWQ3 736 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 SMYD4Q8IYR2 804 aaPredicted RBP22.58■■□□□ 1.21
TOP3A-204ENST00000472959 TRIML1Q8N9V2 468 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 POF1BQ8WVV4 589 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 FAM212AQ96EL1 285 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 KIF12Q96FN5 646 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 NUP62CLQ9H1M0 184 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 RBAKQ9NYW8 714 aaPredicted RBP22.58■■□□□ 1.21
TOP3A-204ENST00000472959 UBQLN1Q9UMX0 589 aaKnown RBP22.58■■□□□ 1.21
TOP3A-204ENST00000472959 PRG3Q9Y2Y8 225 aaPredicted RBP22.58■■□□□ 1.21
TOP3A-204ENST00000472959 MTCH2Q9Y6C9 303 aa22.58■■□□□ 1.21
TOP3A-204ENST00000472959 CASTOR2A6NHX0 329 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 RPL9P32969 192 aaKnown RBP22.57■■□□□ 1.2
TOP3A-204ENST00000472959 PRCPP42785 496 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 CYP2J2P51589 502 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 MORC3Q14149 939 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 PDE12Q6L8Q7 609 aaKnown RBP22.57■■□□□ 1.2
TOP3A-204ENST00000472959 TMEM173Q86WV6 379 aaPredicted RBP22.57■■□□□ 1.2
TOP3A-204ENST00000472959 NT5DC4Q86YG4 428 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 ZSWIM2Q8NEG5 633 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 GPT2Q8TD30 523 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 STXBP5LQ9Y2K9 1186 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 C2CD2Q9Y426 696 aa22.57■■□□□ 1.2
TOP3A-204ENST00000472959 MCM4P33991 863 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 STIM1Q13586 685 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 SURF1Q15526 300 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 SNRNP35Q16560 246 aaKnown RBP22.56■■□□□ 1.2
TOP3A-204ENST00000472959 NFIL3Q16649 462 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 DCLRE1AQ6PJP8 1040 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 ADSSL1Q8N142 457 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 NOC3LQ8WTT2 800 aaKnown RBP22.56■■□□□ 1.2
TOP3A-204ENST00000472959 BCL7CQ8WUZ0 217 aaPredicted RBP22.56■■□□□ 1.2
TOP3A-204ENST00000472959 C18orf25Q96B23 403 aaPredicted RBP22.56■■□□□ 1.2
TOP3A-204ENST00000472959 TLR9Q9NR96 1032 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 DMAC2Q9NW81 257 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 MARCH5Q9NX47 278 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 MYO9BQ13459 2157 aa22.56■■□□□ 1.2
TOP3A-204ENST00000472959 EXOC3O60645 756 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 NR3C1P04150 777 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 DNAJB1P25685 340 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 RPL13P26373 211 aaKnown RBP22.55■■□□□ 1.2
TOP3A-204ENST00000472959 SOX4Q06945 474 aaPredicted RBP22.55■■□□□ 1.2
TOP3A-204ENST00000472959 SPAG1Q07617 926 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 CAMK1Q14012 370 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 BMS1Q14692 1282 aaKnown RBP22.55■■□□□ 1.2
TOP3A-204ENST00000472959 TMEM132DQ14C87 1099 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 UPP1Q16831 310 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 ISM2Q6H9L7 571 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 JADE1Q6IE81 842 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 CBWD2Q8IUF1 395 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 PAAF1Q9BRP4 392 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 ADAM28Q9UKQ2 775 aa22.55■■□□□ 1.2
TOP3A-204ENST00000472959 NLRC5Q86WI3 1866 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 TMEM189-UBE2V1I3L0A0 370 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 BIN1O00499 593 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 TADA2AO75478 443 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 NFICP08651 508 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 CLCNKBP51801 687 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 EDRF1Q3B7T1 1238 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 ZCWPW2Q504Y3 356 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 TIGD5Q53EQ6 642 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 SPATA1Q5VX52 437 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 CENPPQ6IPU0 288 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 BEST2Q8NFU1 509 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 DHTKD1Q96HY7 919 aaPredicted RBP22.54■■□□□ 1.2
TOP3A-204ENST00000472959 NGRNQ9NPE2 291 aaKnown RBP22.54■■□□□ 1.2
TOP3A-204ENST00000472959 TUBGCP4Q9UGJ1 667 aa22.54■■□□□ 1.2
TOP3A-204ENST00000472959 PSMA7O14818 248 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 B3GAT3O94766 335 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 EFEMP2O95967 443 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 BMP6P22004 513 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 LRPAP1P30533 357 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 VPS52Q8N1B4 723 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 MICAL1Q8TDZ2 1067 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 CACTINQ8WUQ7 758 aaKnown RBP22.53■■□□□ 1.2
TOP3A-204ENST00000472959 RABGGTAQ92696 567 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 TSG101Q99816 390 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 GOLGA2P5Q9HBQ8 144 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 CACNG4Q9UBN1 327 aa22.53■■□□□ 1.2
TOP3A-204ENST00000472959 KIAA1671Q9BY89 1806 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 PODXLO00592 558 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 FSCN2O14926 492 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 KIF4AO95239 1232 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 ERVFC1P60507 584 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 CYP24A1Q07973 514 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 ELAVL2Q12926 359 aaKnown RBP22.52■■□□□ 1.2
TOP3A-204ENST00000472959 FUT10Q6P4F1 479 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 TMC7Q7Z402 723 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 RDH13Q8NBN7 331 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 MFSD14AQ96MC6 490 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 TCF25Q9BQ70 676 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 VN1R3Q9BXE9 311 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 PDE11AQ9HCR9 933 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 ENTPD7Q9NQZ7 604 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 FRMD4BQ9Y2L6 1034 aa22.52■■□□□ 1.2
TOP3A-204ENST00000472959 SF3B1O75533 1304 aaKnown RBP eCLIP22.52■■□□□ 1.28e-6■■■■■ 107
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms