RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 PJA2O43164 708 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 PRICKLE3O43900 615 aaPredicted RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 RAD17O75943 681 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 HRGP04196 525 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 CD1AP06126 327 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 MTHFD1P11586 935 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 RAP2BP61225 183 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 RAB1AP62820 205 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 FAM193AP78312 1265 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 FOXL1Q12952 345 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 PLS1Q14651 629 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 CNN3Q15417 329 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SAFBQ15424 915 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 ELAVL1Q15717 326 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 PABPC1LQ4VXU2 614 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 CYB5RLQ6IPT4 315 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 ZNF529Q6P280 563 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SEM1Q6ZVN7 128 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 APBB1IPQ7Z5R6 666 aaPredicted RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 KRTAP1-3Q8IUG1 177 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 FUKQ8N0W3 1084 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 FAM43AQ8N2R8 423 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 DCBLD1Q8N8Z6 715 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 PJA1Q8NG27 643 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 PLBD2Q8NHP8 589 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 TEPSINQ96N21 525 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 MYOCQ99972 504 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SPON1Q9HCB6 807 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SARS2Q9NP81 518 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 DDX21Q9NR30 783 aaKnown RBP eCLIP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 CNNM1Q9NRU3 951 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 GNL3LQ9NVN8 582 aaKnown RBP6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SLC52A1Q9NWF4 448 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 SH3BP1Q9Y3L3 701 aa6.1□□□□□ -1.43
PRPF40A-208ENST00000472760 TCRBV7S2A1N4TA0A589 114 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 CFAP69A5D8W1 941 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 F2RL2O00254 374 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 FOXS1O43638 330 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 IPO13O94829 963 aaKnown RBP6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 HHEXQ03014 270 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 HDAC1Q13547 482 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 BMT2Q1RMZ1 405 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 DACT2Q5SW24 774 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 LCE3BQ5TA77 95 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 RNF220Q5VTB9 566 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 EFCAB12Q6NXP0 572 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 DOK3Q7L591 496 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 MAEAQ7L5Y9 396 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 POLNQ7Z5Q5 900 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 ELOA2Q8IYF1 753 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 ZFP28Q8NHY6 868 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 ST8SIA2Q92186 375 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 TFAP2CQ92754 450 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 HECAQ9UBI9 543 aaPredicted RBP6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 STAP2Q9UGK3 403 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 SLC23A1Q9UHI7 598 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 CLCA2Q9UQC9 943 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 PCDHA1Q9Y5I3 950 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 SLC30A1Q9Y6M5 507 aa6.09□□□□□ -1.43
PRPF40A-208ENST00000472760 NT5C1B-RDH14C9J2C7 533 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 GOLIM4O00461 696 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 GPR42O15529 346 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 POMCP01189 267 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 AMHP03971 560 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 GNAI3P08754 354 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 ALAS1P13196 640 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 PHKG2P15735 406 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 PRDX5P30044 214 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 GNAI1P63096 354 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 ATXN7L2Q5T6C5 722 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 UBE3BQ7Z3V4 1068 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 SGMS1Q86VZ5 419 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 GSPT2Q8IYD1 628 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 MB21D1Q8N884 522 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 NLGN4YQ8NFZ3 816 aaPredicted RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 BRIX1Q8TDN6 353 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 NT5C1BQ96P26 610 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 LSM14BQ9BX40 385 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 PACSIN1Q9BY11 444 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 SIDT1Q9NXL6 827 aaKnown RBP6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 POGKQ9P215 609 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 USP25Q9UHP3 1055 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 CPA4Q9UI42 421 aa6.08□□□□□ -1.44
PRPF40A-208ENST00000472760 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 A0A1W2PPL8 197 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 APAF1O14727 1248 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 PHGDHO43175 533 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 MGEA5O60502 916 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 SBK3P0C264 359 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 PICALMQ13492 652 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 UBXN2BQ14CS0 331 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 KHDC1LQ5JSQ8 128 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 ANKRD35Q8N283 1001 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 IL17RDQ8NFM7 739 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 MDGA1Q8NFP4 955 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 LRTOMTQ8WZ04 291 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 TNPO1Q92973 898 aaKnown RBP6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 NDC1Q9BTX1 674 aa6.07□□□□□ -1.44
PRPF40A-208ENST00000472760 C1orf43Q9BWL3 253 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms