RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PRSS36Q5K4E3 855 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 PPP4R3AQ6IN85 833 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 GALNT17Q6IS24 598 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 TRIM22Q8IYM9 498 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 BACE2Q9Y5Z0 518 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 PIAS3Q9Y6X2 628 aa21.04■□□□□ 0.96
SORT1-203ENST00000471996 ARHGEF37A1IGU5 675 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 NRG2O14511 850 aaPredicted RBP21.03■□□□□ 0.96
SORT1-203ENST00000471996 TBX3O15119 743 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 DGAT1O75907 488 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 PDIA3P30101 505 aaKnown RBP21.03■□□□□ 0.96
SORT1-203ENST00000471996 LIMK1P53667 647 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 NCAPH2Q6IBW4 605 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 BLOC1S2Q6QNY1 142 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 LONP2Q86WA8 852 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 TPH2Q8IWU9 490 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 SPEM1Q8N4L4 309 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 JAKMIP1Q96N16 626 aaKnown RBP21.03■□□□□ 0.96
SORT1-203ENST00000471996 ASB16Q96NS5 453 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 CXCL16Q9H2A7 254 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 SNTG2Q9NY99 539 aa21.03■□□□□ 0.96
SORT1-203ENST00000471996 F5P12259 2224 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 BAHCC1Q9P281 2608 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 TMEM189-UBE2V1I3L0A0 370 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 TM4SF5O14894 197 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 MICAL2O94851 1124 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 SLITRK3O94933 977 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 LRG1P02750 347 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 GCFC2P16383 781 aaKnown RBP21.02■□□□□ 0.96
SORT1-203ENST00000471996 PSMC3P17980 439 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 GDI1P31150 447 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 SSRP1Q08945 709 aaKnown RBP21.02■□□□□ 0.96
SORT1-203ENST00000471996 COL9A2Q14055 689 aaPredicted RBP21.02■□□□□ 0.96
SORT1-203ENST00000471996 VITQ6UXI7 678 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 PPP4R3CPQ6ZMV5 832 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.96
SORT1-203ENST00000471996 KCNB2Q92953 911 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 TCEAL4Q96EI5 215 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 PRIMPOLQ96LW4 560 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 CORO1BQ9BR76 489 aa21.02■□□□□ 0.96
SORT1-203ENST00000471996 ZNF197O14709 1029 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 MARCH6O60337 910 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 RECQL4O94761 1208 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 B3GAT3O94766 335 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 PAPSS2O95340 614 aaPredicted RBP21.01■□□□□ 0.95
SORT1-203ENST00000471996 DEXIO95424 95 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 IGFBP6P24592 240 aaPredicted RBP21.01■□□□□ 0.95
SORT1-203ENST00000471996 EVCP57679 992 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 ANKS3Q6ZW76 656 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 NEK8Q86SG6 692 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 FAM160A2Q8N612 972 aaPredicted RBP21.01■□□□□ 0.95
SORT1-203ENST00000471996 ZNF461Q8TAF7 563 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 POLR3FQ9H1D9 316 aaPredicted RBP21.01■□□□□ 0.95
SORT1-203ENST00000471996 ANKEF1Q9NU02 776 aa21.01■□□□□ 0.95
SORT1-203ENST00000471996 PRMT7Q9NVM4 692 aaPredicted RBP21.01■□□□□ 0.95
SORT1-203ENST00000471996 WDR27A2RRH5 827 aa21■□□□□ 0.95
SORT1-203ENST00000471996 K7ESF4 209 aa21■□□□□ 0.95
SORT1-203ENST00000471996 LYPLA2O95372 231 aa21■□□□□ 0.95
SORT1-203ENST00000471996 RPS6KB1P23443 525 aa21■□□□□ 0.95
SORT1-203ENST00000471996 CCNE1P24864 410 aa21■□□□□ 0.95
SORT1-203ENST00000471996 TKTP29401 623 aaKnown RBP21■□□□□ 0.95
SORT1-203ENST00000471996 ELF1P32519 619 aa21■□□□□ 0.95
SORT1-203ENST00000471996 PTGDRQ13258 359 aa21■□□□□ 0.95
SORT1-203ENST00000471996 AASDHQ4L235 1098 aaPredicted RBP21■□□□□ 0.95
SORT1-203ENST00000471996 DEPDC1BQ8WUY9 529 aa21■□□□□ 0.95
SORT1-203ENST00000471996 SMARCD2Q92925 531 aa21■□□□□ 0.95
SORT1-203ENST00000471996 DDX27Q96GQ7 796 aaKnown RBP21■□□□□ 0.95
SORT1-203ENST00000471996 FZD8Q9H461 694 aa21■□□□□ 0.95
SORT1-203ENST00000471996 SH2B1Q9NRF2 756 aaPredicted RBP21■□□□□ 0.95
SORT1-203ENST00000471996 CCDC194A0A1B0GVG4 234 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 PRRG1O14668 218 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 ZNF263O14978 683 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 CCNT1O60563 726 aaKnown RBP20.99■□□□□ 0.95
SORT1-203ENST00000471996 ABLIM3O94929 683 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 PROS1P07225 676 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 CCR2P41597 374 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 RBM25P49756 843 aaKnown RBP20.99■□□□□ 0.95
SORT1-203ENST00000471996 MLLT6P55198 1093 aaPredicted RBP20.99■□□□□ 0.95
SORT1-203ENST00000471996 ROR1Q01973 937 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 LRRC32Q14392 662 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 FAM187BQ17R55 369 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 HEATR6Q6AI08 1181 aaKnown RBP20.99■□□□□ 0.95
SORT1-203ENST00000471996 SLC8B1Q6J4K2 584 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 CD300LGQ6UXG3 332 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 PDZD4Q76G19 769 aaPredicted RBP20.99■□□□□ 0.95
SORT1-203ENST00000471996 ZSWIM3Q96MP5 696 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 PDZD7Q9H5P4 517 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 ATRXP46100 2492 aa20.99■□□□□ 0.95
SORT1-203ENST00000471996 VWA8A3KMH1 1905 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 LRRIQ4A6NIV6 560 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 TTLL13PA6NNM8 815 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 N4BP3O15049 544 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 TRAPPC3O43617 180 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 RARRES1P49788 294 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 BMP2KLQ5H9B9 411 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 CEP68Q76N32 757 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 POTEDQ86YR6 584 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 NOSTRINQ8IVI9 506 aa20.98■□□□□ 0.95
SORT1-203ENST00000471996 SLFN12Q8IYM2 578 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms