RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 CNTN6Q9UQ52 1028 aa11.38□□□□□ -0.59
APLF-204ENST00000471727 PASKQ96RG2 1323 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 LRRIQ4A6NIV6 560 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 TMEM110-MUSTN1A8MSY1 372 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 MYO1FO00160 1098 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 EBAG9O00559 213 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 CXCL11O14625 94 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 FSCN2O14926 492 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 COILP38432 576 aaPredicted RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 NSFP46459 744 aaKnown RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 SOX10P56693 466 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 SP2Q02086 613 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 SP4Q02446 784 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 CUL2Q13617 745 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 MXD4Q14582 209 aaPredicted RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 UAP1Q16222 522 aaPredicted RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 PRAMEF18Q5VWM3 479 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 NAA35Q5VZE5 725 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 METTL7BQ6UX53 244 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 B4GALNT4Q76KP1 1039 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 HOOK3Q86VS8 718 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 C3orf20Q8ND61 904 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 ASAP3Q8TDY4 903 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 ATP8B4Q8TF62 1192 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 GRK7Q8WTQ7 553 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 UBLCP1Q8WVY7 318 aaPredicted RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 KRT35Q92764 455 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 TMEM143Q96AN5 459 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 SGIP1Q9BQI5 828 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 MSTO1Q9BUK6 570 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 TXLNGYQ9BZA5 131 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 CELF4Q9BZC1 486 aaKnown RBP11.37□□□□□ -0.59
APLF-204ENST00000471727 IMPG2Q9BZV3 1241 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 C2orf40Q9H1Z8 148 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 DPH5Q9H2P9 285 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 PLEKHA4Q9H4M7 779 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 AZI2Q9H6S1 392 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 ZDHHC18Q9NUE0 388 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 SNCAIPQ9Y6H5 919 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 SCINQ9Y6U3 715 aa11.37□□□□□ -0.59
APLF-204ENST00000471727 GSTTP1A0A1W2PQM5 241 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 TULP2O00295 520 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 IRF6O14896 467 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 FARP2O94887 1054 aaPredicted RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 NUDT17P0C025 328 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 PYGMP11217 842 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 UBA1P22314 1058 aaKnown RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 CETN2P41208 172 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 IREB2P48200 963 aaKnown RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 NLRP11P59045 1033 aaKnown RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 CCDC137Q6PK04 289 aaKnown RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 CRELD2Q6UXH1 353 aaPredicted RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 SEPT14Q6ZU15 432 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 SRLQ86TD4 932 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 ABRAQ8N0Z2 381 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 BCAS4Q8TDM0 211 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 BBXQ8WY36 941 aaPredicted RBP11.36□□□□□ -0.59
APLF-204ENST00000471727 SPATC1LQ9H0A9 340 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 NEUROG2Q9H2A3 272 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 NR2E1Q9Y466 385 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 ADGRA2Q96PE1 1338 aa11.36□□□□□ -0.59
APLF-204ENST00000471727 PSTPIP1O43586 416 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 TOM1L1O75674 476 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CLTAP09496 248 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ACO1P21399 889 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 MDH1P40925 334 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 SLC26A2P50443 739 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 HIRAP54198 1017 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 IRX3P78415 501 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 CNTN2Q02246 1040 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CAV1Q03135 178 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ZNF844Q08AG5 666 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 IFFO1Q0D2I5 559 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 VGLL4Q14135 290 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 KCTD16Q68DU8 428 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PLPPR4Q7Z2D5 763 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PHF13Q86YI8 300 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 WDR49Q8IV35 697 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 BRSK2Q8IWQ3 736 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ZBTB8OSQ8IWT0 167 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 CCDC105Q8IYK2 499 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 ZBTB9Q96C00 473 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 FAXDC2Q96IV6 333 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 TRIM51Q9BSJ1 452 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 TMEM109Q9BVC6 243 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 MRPL4Q9BYD3 311 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 STMN4Q9H169 189 aaPredicted RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 EPN3Q9H201 632 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 PABPC3Q9H361 631 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 CNOT10Q9H9A5 744 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 ERVK-5Q9HDB9 667 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ADARB2Q9NS39 739 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 RSPH14Q9UHP6 348 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 ANAPC7Q9UJX3 599 aa11.35□□□□□ -0.59
APLF-204ENST00000471727 RRP15Q9Y3B9 282 aaKnown RBP11.35□□□□□ -0.59
APLF-204ENST00000471727 PCDHB4Q9Y5E5 795 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms