RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 CABP5Q9NP86 173 aa5.34□□□□□ -1.55
VPS13A-210ENST00000471439 SPTLC3Q9NUV7 552 aa5.34□□□□□ -1.55
VPS13A-210ENST00000471439 PGAP2Q9UHJ9 254 aa5.34□□□□□ -1.55
VPS13A-210ENST00000471439 PIK3C2GO75747 1445 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 CARMIL3Q8ND23 1372 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 PATE3B3GLJ2 98 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 GOLGA6L22H0YM25 854 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 CUTAO60888 179 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 APPP05067 770 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 IBSPP21815 317 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-210ENST00000471439 IL2P60568 153 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 PCOLCEQ15113 449 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 SLC9C1Q4G0N8 1177 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 TMEM200BQ69YZ2 307 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 ESRP1Q6NXG1 681 aaKnown RBP5.33□□□□□ -1.56
VPS13A-210ENST00000471439 DPP8Q6V1X1 898 aaPredicted RBP5.33□□□□□ -1.56
VPS13A-210ENST00000471439 TAX1BP1Q86VP1 789 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 ANKRD13AQ8IZ07 590 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 TTC9BQ8N6N2 239 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 OR14K1Q8NGZ2 314 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 ATL2Q8NHH9 583 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 Q8TCH9 128 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 COG1Q8WTW3 980 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 CFHR4Q92496 578 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 GPR20Q99678 358 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 TMX1Q9H3N1 280 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 MS4A5Q9H3V2 200 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 OXSMQ9NWU1 459 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 ASB1Q9Y576 335 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 KDM3BQ7LBC6 1761 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 USP24Q9UPU5 2620 aa5.33□□□□□ -1.56
VPS13A-210ENST00000471439 XIRP2A4UGR9 3374 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 A0A0G2JNJ9 132 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 MATN3O15232 486 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 TGM5O43548 720 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 GAS7O60861 476 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 FKBP9O95302 570 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 PRLP01236 227 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 SLC9A1P19634 815 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 TM4SF4P48230 202 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 SCNN1BP51168 640 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 ANAPC15P60006 121 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 TMPRSS15P98073 1019 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 ALDH6A1Q02252 535 aaKnown RBP5.32□□□□□ -1.56
VPS13A-210ENST00000471439 EIF4HQ15056 248 aaKnown RBP5.32□□□□□ -1.56
VPS13A-210ENST00000471439 AGBL4Q5VU57 503 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 FKBP9P1Q75LS8 142 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 SPRED1Q7Z699 444 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 KIF18BQ86Y91 864 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 FUKQ8N0W3 1084 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 KIAA1958Q8N8K9 716 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 CD99L2Q8TCZ2 262 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 USP7Q93009 1102 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 BORCS6Q96GS4 357 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 C1QTNF3Q9BXJ4 246 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 KLC2Q9H0B6 622 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 EMC7Q9NPA0 242 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 ADARB2Q9NS39 739 aaKnown RBP5.32□□□□□ -1.56
VPS13A-210ENST00000471439 Q9UFV3 132 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 NR2E1Q9Y466 385 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 NFAT5O94916 1531 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 ARFGEF2Q9Y6D5 1785 aa5.32□□□□□ -1.56
VPS13A-210ENST00000471439 ZNF609O15014 1411 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 DNAH14Q0VDD8 3507 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 USP42Q9H9J4 1324 aaKnown RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 RIF1Q5UIP0 2472 aaKnown RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 LCHNA4D1U4 455 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 GPR39O43194 453 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 RPS6KA4O75676 772 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 TNFRSF1AP19438 455 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 SLC6A3Q01959 620 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 DUSP8Q13202 625 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 ZXDCQ2QGD7 858 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 GRAMD4Q6IC98 578 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 CC2D1AQ6P1N0 951 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 KCNH5Q8NCM2 988 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 GIMAP8Q8ND71 665 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 PIGBQ92521 554 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 DVL3Q92997 716 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 TTC1Q99614 292 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 TRIM8Q9BZR9 551 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 IFT22Q9H7X7 185 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 SEC61A2Q9H9S3 476 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 VTA1Q9NP79 307 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 MCM8Q9UJA3 840 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 ZMYND8Q9ULU4 1186 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 ZFR2Q9UPR6 939 aaKnown RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 ZKSCAN5Q9Y2L8 839 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 ZNF646O15015 1829 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 COL2A1P02458 1487 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 MRC1P22897 1456 aa5.31□□□□□ -1.56
VPS13A-210ENST00000471439 COL5A3P25940 1745 aaPredicted RBP5.31□□□□□ -1.56
VPS13A-210ENST00000471439 H7C1D1 291 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 ARHGAP6O43182 974 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 CDC14BO60729 498 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 KATNA1O75449 491 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 LSSP48449 732 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 ANTXR2P58335 489 aa5.3□□□□□ -1.56
VPS13A-210ENST00000471439 RAC3P60763 192 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms