RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 FAM213AQ9BRX8 229 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 COLEC11Q9BWP8 271 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 ZBP1Q9H171 429 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 ENTPD7Q9NQZ7 604 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 SLC38A7Q9NVC3 462 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 TUBGCP4Q9UGJ1 667 aa21.49■■□□□ 1.03
HDAC7-220ENST00000471235 MTCL1Q9Y4B5 1905 aaKnown RBP21.49■■□□□ 1.03
HDAC7-220ENST00000471235 GOLGA8IPA6NC78 632 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 GOLGA8JA6NMD2 632 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 EFEMP2O95967 443 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 KNOP1Q1ED39 458 aaKnown RBP21.48■■□□□ 1.03
HDAC7-220ENST00000471235 ELOA2Q8IYF1 753 aaPredicted RBP21.48■■□□□ 1.03
HDAC7-220ENST00000471235 RNF168Q8IYW5 571 aaPredicted RBP21.48■■□□□ 1.03
HDAC7-220ENST00000471235 VPS52Q8N1B4 723 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 HASPINQ8TF76 798 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 FAM212AQ96EL1 285 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 KIF12Q96FN5 646 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 UROC1Q96N76 676 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 GBP4Q96PP9 640 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 HERC2P3Q9BVR0 1158 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 HOOK1Q9UJC3 728 aaKnown RBP21.48■■□□□ 1.03
HDAC7-220ENST00000471235 ADAM28Q9UKQ2 775 aa21.48■■□□□ 1.03
HDAC7-220ENST00000471235 KIAA0391O15091 583 aaKnown RBP21.47■■□□□ 1.03
HDAC7-220ENST00000471235 EXTL3O43909 919 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 LDHAP00338 332 aaKnown RBP21.47■■□□□ 1.03
HDAC7-220ENST00000471235 NFICP08651 508 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 CLCNKBP51801 687 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 POU5F1Q01860 360 aaKnown RBP21.47■■□□□ 1.03
HDAC7-220ENST00000471235 JADE1Q6IE81 842 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 PDE12Q6L8Q7 609 aaKnown RBP21.47■■□□□ 1.03
HDAC7-220ENST00000471235 HS2ST1Q7LGA3 356 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 BRSK2Q8IWQ3 736 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 CD302Q8IX05 232 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 GPD1LQ8N335 351 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 TMEM130Q8N3G9 435 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 SPATA20Q8TB22 786 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 NOC3LQ8WTT2 800 aaKnown RBP21.47■■□□□ 1.03
HDAC7-220ENST00000471235 SMARCE1Q969G3 411 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 KCTD10Q9H3F6 313 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 RMND1Q9NWS8 449 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 HSPBP1Q9NZL4 362 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 PCDHA5Q9Y5H7 936 aa21.47■■□□□ 1.03
HDAC7-220ENST00000471235 TMEM189-UBE2V1I3L0A0 370 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 CLIC2O15247 247 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 SMC2O95347 1197 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 WNT7BP56706 349 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 SNRPFP62306 86 aaKnown RBP21.46■■□□□ 1.03
HDAC7-220ENST00000471235 SMC1AQ14683 1233 aaKnown RBP21.46■■□□□ 1.03
HDAC7-220ENST00000471235 ZBTB6Q15916 424 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 UPP1Q16831 310 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 FUT10Q6P4F1 479 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 TMC7Q7Z402 723 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 C12orf56Q8IXR9 622 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 C3orf58Q8NDZ4 430 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 GSDMAQ96QA5 445 aa21.46■■□□□ 1.03
HDAC7-220ENST00000471235 RBAKQ9NYW8 714 aaPredicted RBP21.46■■□□□ 1.03
HDAC7-220ENST00000471235 CGNQ9P2M7 1197 aaKnown RBP21.46■■□□□ 1.03
HDAC7-220ENST00000471235 PRUNE2Q8WUY3 3088 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 HIDE1A8MVS5 230 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 PODXLO00592 558 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 SOD2P04179 222 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 CTSAP10619 480 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 IGFBP6P24592 240 aaPredicted RBP21.45■■□□□ 1.02
HDAC7-220ENST00000471235 CYP2J2P51589 502 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 HYAL1Q12794 435 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 CD300LGQ6UXG3 332 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 EFCAB13Q8IY85 973 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 SMYD4Q8IYR2 804 aaPredicted RBP21.45■■□□□ 1.02
HDAC7-220ENST00000471235 MICAL1Q8TDZ2 1067 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 AUTS2Q8WXX7 1259 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 TSPAN18Q96SJ8 248 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 GPR62Q9BZJ7 368 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 ASB7Q9H672 318 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 NGRNQ9NPE2 291 aaKnown RBP21.45■■□□□ 1.02
HDAC7-220ENST00000471235 LMBRD1Q9NUN5 540 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 STK39Q9UEW8 545 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 UBQLN1Q9UMX0 589 aaKnown RBP21.45■■□□□ 1.02
HDAC7-220ENST00000471235 MAPK8IP1Q9UQF2 711 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 DERAQ9Y315 318 aa21.45■■□□□ 1.02
HDAC7-220ENST00000471235 SF3B1O75533 1304 aaKnown RBP eCLIP21.45■■□□□ 1.029e-7■■■■■ 32.1
HDAC7-220ENST00000471235 TADA2AO75478 443 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 IL18RAPO95256 599 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 GTF2F1P35269 517 aaKnown RBP eCLIP21.44■■□□□ 1.02
HDAC7-220ENST00000471235 GUCY2FP51841 1108 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 TMEM132DQ14C87 1099 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 SKIV2LQ15477 1246 aaKnown RBP21.44■■□□□ 1.02
HDAC7-220ENST00000471235 PTPN14Q15678 1187 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 TAS1R1Q7RTX1 841 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 CBWD2Q8IUF1 395 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 GUF1Q8N442 669 aaKnown RBP21.44■■□□□ 1.02
HDAC7-220ENST00000471235 GOLGA5Q8TBA6 731 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 DDX27Q96GQ7 796 aaKnown RBP21.44■■□□□ 1.02
HDAC7-220ENST00000471235 FBXL18Q96ME1 805 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 PRDM6Q9NQX0 595 aa21.44■■□□□ 1.02
HDAC7-220ENST00000471235 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.44■■□□□ 1.02
HDAC7-220ENST00000471235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.43■■□□□ 1.02
HDAC7-220ENST00000471235 C2orf71A6NGG8 1288 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 XPOTO43592 962 aaKnown RBP21.43■■□□□ 1.02
HDAC7-220ENST00000471235 B3GAT3O94766 335 aa21.43■■□□□ 1.02
HDAC7-220ENST00000471235 KIF20AO95235 890 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms