RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 BORCS6Q96GS4 357 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 MRI1Q9BV20 369 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 LSM14BQ9BX40 385 aaKnown RBP5.21□□□□□ -1.58
VPS8-220ENST00000469713 BHMT2Q9H2M3 363 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 PLA2G3Q9NZ20 509 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 FEZ2Q9UHY8 353 aaPredicted RBP5.21□□□□□ -1.58
VPS8-220ENST00000469713 PCDHGB6Q9Y5F9 930 aa5.21□□□□□ -1.58
VPS8-220ENST00000469713 GRM6O15303 877 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 PRICKLE3O43900 615 aaPredicted RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 PLATP00750 562 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 SBK3P0C264 359 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 MSX2P35548 267 aaPredicted RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 RAP2BP61225 183 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 FAM193AP78312 1265 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 SAFBQ15424 915 aaKnown RBP eCLIP5.2□□□□□ -1.58
VPS8-220ENST00000469713 UBXN11Q5T124 520 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 SYCP2LQ5T4T6 812 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 RNF220Q5VTB9 566 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 IL31Q6EBC2 164 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 DARS2Q6PI48 645 aaKnown RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 SEM1Q6ZVN7 128 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 MAEAQ7L5Y9 396 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 LIMS2Q7Z4I7 341 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 FUKQ8N0W3 1084 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 CELF5Q8N6W0 485 aaKnown RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 MTFMTQ96DP5 389 aaKnown RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 FAM167AQ96KS9 214 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 C1orf43Q9BWL3 253 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 ZMAT3Q9HA38 289 aaKnown RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 ATP6V0A4Q9HBG4 840 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 PARD6AQ9NPB6 346 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 ZFR2Q9UPR6 939 aaKnown RBP5.2□□□□□ -1.58
VPS8-220ENST00000469713 SH3BP1Q9Y3L3 701 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 PCDHA1Q9Y5I3 950 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 PNPLA7Q6ZV29 1317 aa5.2□□□□□ -1.58
VPS8-220ENST00000469713 TCRBV7S2A1N4TA0A589 114 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CFAP69A5D8W1 941 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 B5MCH6 92 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 KIAA0391O15091 583 aaKnown RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 PMM2O15305 246 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 GPR42O15529 346 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 PJA2O43164 708 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 FOXS1O43638 330 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 RAD17O75943 681 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 SNRPA1P09661 255 aaKnown RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 NBPF7P0C2Y1 421 aaPredicted RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 PRDX5P30044 214 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 NEK3P51956 506 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CLRN1P58418 232 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CREMQ03060 361 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 FOXL1Q12952 345 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 UBE4AQ14139 1066 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 FGL2Q14314 439 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CSRP2Q16527 193 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 PABPC1LQ4VXU2 614 aaKnown RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 DACT2Q5SW24 774 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 ZFYVE27Q5T4F4 411 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 ZNF529Q6P280 563 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 APOA5Q6Q788 366 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 UBE3BQ7Z3V4 1068 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 PPP1R3BQ86XI6 285 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 FAM90A1Q86YD7 464 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 ELOA2Q8IYF1 753 aaPredicted RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 CPPED1Q9BRF8 314 aaPredicted RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 NDC1Q9BTX1 674 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CPEB1Q9BZB8 566 aaKnown RBP5.19□□□□□ -1.58
VPS8-220ENST00000469713 WDCPQ9H6R7 721 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 USP25Q9UHP3 1055 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 CPA4Q9UI42 421 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 HDAC5Q9UQL6 1122 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 SLC30A1Q9Y6M5 507 aa5.19□□□□□ -1.58
VPS8-220ENST00000469713 ANO9A1A5B4 782 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 TBKBP1A7MCY6 615 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 GOLIM4O00461 696 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 PQBP1O60828 265 aaKnown RBP5.18□□□□□ -1.58
VPS8-220ENST00000469713 AHSGP02765 367 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 INHBBP09529 407 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 FTH1P19P0C7X4 201 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 MTHFD1P11586 935 aaKnown RBP5.18□□□□□ -1.58
VPS8-220ENST00000469713 PHKG2P15735 406 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 GNAT2P19087 354 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 PEX2P28328 305 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 SLC6A4P31645 630 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 CACNB3P54284 484 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 RHBDL3P58872 404 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 GPSM2P81274 684 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 SEMA5AQ13591 1074 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 ELAVL1Q15717 326 aaKnown RBP5.18□□□□□ -1.58
VPS8-220ENST00000469713 ATP2B3Q16720 1220 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 BMT2Q1RMZ1 405 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 KRTAP19-4Q3LI73 84 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 MFSD5Q6N075 450 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 DOK3Q7L591 496 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 GPRIN1Q7Z2K8 1008 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 APBB1IPQ7Z5R6 666 aaPredicted RBP5.18□□□□□ -1.58
VPS8-220ENST00000469713 FAM83AQ86UY5 434 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 CIR1Q86X95 450 aaPredicted RBP5.18□□□□□ -1.58
VPS8-220ENST00000469713 D2HGDHQ8N465 521 aa5.18□□□□□ -1.58
VPS8-220ENST00000469713 MB21D1Q8N884 522 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms