RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 TOB1P50616 345 aaPredicted RBP13.49□□□□□ -0.25
HDAC3-204ENST00000469207 ARPP19P56211 112 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 PEX3P56589 373 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 IL17AQ16552 155 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 SLC5A9Q2M3M2 681 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.49□□□□□ -0.25
HDAC3-204ENST00000469207 TAS1R3Q7RTX0 852 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 KIAA2013Q8IYS2 634 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 ERMNQ8TAM6 284 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 DDX27Q96GQ7 796 aaKnown RBP13.49□□□□□ -0.25
HDAC3-204ENST00000469207 IFT74Q96LB3 600 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 DDX19AQ9NUU7 478 aaKnown RBP13.49□□□□□ -0.25
HDAC3-204ENST00000469207 LRWD1Q9UFC0 647 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 CACNA1IQ9P0X4 2223 aa13.49□□□□□ -0.25
HDAC3-204ENST00000469207 KANSL1LA0AUZ9 987 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 FAM170BA6NMN3 283 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 MEFVO15553 781 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 XYLBO75191 536 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 NPTX2P47972 431 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 ELAVL2Q12926 359 aaKnown RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 UBXN2BQ14CS0 331 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 DCAF4L1Q3SXM0 396 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 PABPC1LQ4VXU2 614 aaKnown RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 SEZ6Q53EL9 994 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 ALKAL1Q6UXT8 129 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 DAW1Q8N136 415 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 FBXO18Q8NFZ0 1043 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 C18orf25Q96B23 403 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 ZBTB45Q96K62 511 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 TARS2Q9BW92 718 aaKnown RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 CDT1Q9H211 546 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 FOXP1Q9H334 677 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 PTPRHQ9HD43 1115 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 TNFSF13BQ9Y275 285 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 PCDHB6Q9Y5E3 794 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 ZFP37Q9Y6Q3 630 aaPredicted RBP13.48□□□□□ -0.25
HDAC3-204ENST00000469207 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
HDAC3-204ENST00000469207 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 SEC24AO95486 1093 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 HOXA9P31269 272 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 RBM25P49756 843 aaKnown RBP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 PTGDRQ13258 359 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 PPP2R5AQ15172 486 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 MLF2Q15773 248 aaPredicted RBP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 TANGO2Q6ICL3 276 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 KCNK18Q7Z418 384 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 RMDN1Q96DB5 314 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 TCEAL4Q96EI5 215 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 DDX23Q9BUQ8 820 aaKnown RBP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 RUSC1Q9BVN2 902 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 LIMCH1Q9UPQ0 1083 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 MRPS23Q9Y3D9 190 aaKnown RBP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 DNAH14Q0VDD8 3507 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 FRYLO94915 3013 aa13.47□□□□□ -0.25
HDAC3-204ENST00000469207 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
HDAC3-204ENST00000469207 WDR27A2RRH5 827 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 SHISA7A6NL88 538 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 HIP1RO75146 1068 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 RHOP08100 348 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 HARSP12081 509 aaKnown RBP13.46□□□□□ -0.25
HDAC3-204ENST00000469207 CEBPBP17676 345 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 GRM5P41594 1212 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 EFNA5P52803 228 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 ROR1Q01973 937 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 RAD51AP2Q09MP3 1159 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 GNL2Q13823 731 aaKnown RBP13.46□□□□□ -0.25
HDAC3-204ENST00000469207 XKR4Q5GH76 650 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 VARS2Q5ST30 1063 aaKnown RBP13.46□□□□□ -0.25
HDAC3-204ENST00000469207 PDXDC1Q6P996 788 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 TSSK4Q6SA08 328 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 MTSS1LQ765P7 747 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 ZNF461Q8TAF7 563 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 KIFAP3Q92845 792 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 SHDQ96IW2 340 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 SPATA6Q9NWH7 488 aaPredicted RBP13.46□□□□□ -0.25
HDAC3-204ENST00000469207 BACE2Q9Y5Z0 518 aa13.46□□□□□ -0.25
HDAC3-204ENST00000469207 GVINP1Q7Z2Y8 2422 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 PODXLO00592 558 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ABLIM1O14639 778 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 SLC16A4O15374 487 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 TBC1D4O60343 1298 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ABLIM3O94929 683 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 PTPN2P17706 415 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 MUTP22033 750 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 CCR2P41597 374 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 CSTF1Q05048 431 aaKnown RBP13.45□□□□□ -0.26
HDAC3-204ENST00000469207 SPAG1Q07617 926 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 MAPK7Q13164 816 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 FZD5Q13467 585 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 PDIA5Q14554 519 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ZRSR1Q15695 479 aaKnown RBP13.45□□□□□ -0.26
HDAC3-204ENST00000469207 ZNF568Q3ZCX4 644 aa13.45□□□□□ -0.26
HDAC3-204ENST00000469207 HAUS3Q68CZ6 603 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms