RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 KIFC3Q9BVG8 833 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 TBX20Q9UMR3 447 aa16.88■□□□□ 0.29
TSPAN4-211ENST00000468468 FSCN2O14926 492 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 CNGA1P29973 690 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 GPC3P51654 580 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 KRT17Q04695 432 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 CNGA2Q16280 664 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 TRMT10CQ7L0Y3 403 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 TAS1R2Q8TE23 839 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 DDX1Q92499 740 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 ZKSCAN4Q969J2 545 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 SGSM3Q96HU1 749 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 TIPINQ9BVW5 301 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 PLVAPQ9BX97 442 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 ROPN1BQ9BZX4 212 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 CDC42EP4Q9H3Q1 356 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 CCDC134Q9H6E4 229 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 ROPN1Q9HAT0 212 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 A1CFQ9NQ94 594 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 COQ4Q9Y3A0 265 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 RDXP35241 583 aaKnown RBP16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 XRCC4Q13426 336 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 ITIH4Q14624 930 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 LONRF1Q17RB8 773 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 PCNX4Q63HM2 1172 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 EXOC3L1Q86VI1 746 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 C4orf19Q8IY42 314 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 FBXL13Q8NEE6 735 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 LPAR1Q92633 364 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 TBC1D22BQ9NU19 505 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 RAB20Q9NX57 234 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 ASIC3Q9UHC3 531 aa16.87■□□□□ 0.29
TSPAN4-211ENST00000468468 DNAJC8O75937 253 aaPredicted RBP16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 ACSL3O95573 720 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 CALCAP01258 141 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 KRT5P13647 590 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 MAPK4P31152 587 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 SNCBQ16143 134 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 MFSD5Q6N075 450 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 TAX1BP1Q86VP1 789 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 WHRNQ9P202 907 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 ANAPC7Q9UJX3 599 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 ZNF541Q9H0D2 1346 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 GRIN3BO60391 1043 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 EIF2AK2P19525 551 aaKnown RBP16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 CLEC16AQ2KHT3 1053 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 TMEM161BQ8NDZ6 487 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 AAASQ9NRG9 546 aa16.86■□□□□ 0.29
TSPAN4-211ENST00000468468 FZD9O00144 591 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 MYCLP12524 364 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 NPTX2P47972 431 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 MCCD1P59942 119 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 PSMC5P62195 406 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 SLC17A8Q8NDX2 589 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 SLCO2A1Q92959 643 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 WNK4Q96J92 1243 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 TAAR1Q96RJ0 339 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 NSRP1Q9H0G5 558 aaKnown RBP16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 CHST7Q9NS84 486 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 TCEAL9Q9UHQ7 104 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 DENND3A2RUS2 1198 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 TP73O15350 636 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 CHKAP35790 457 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 TMEM132AQ24JP5 1023 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 ZNF568Q3ZCX4 644 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 OTUD6AQ7L8S5 288 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 MAP4K3Q8IVH8 894 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 SYTL5Q8TDW5 730 aaPredicted RBP16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 ATG4AQ8WYN0 398 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 HOMER3Q9NSC5 361 aa16.85■□□□□ 0.29
TSPAN4-211ENST00000468468 ATP9AO75110 1047 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 ITIH2P19823 946 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 LRRC14Q15048 493 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 TRIP13Q15645 432 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 SV2AQ7L0J3 742 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 PHLDB2Q86SQ0 1253 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 MGARPQ8TDB4 240 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 TMC2Q8TDI7 906 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 DYDC1Q8WWB3 177 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 ARHGEF2Q92974 986 aaKnown RBP16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 PI4K2AQ9BTU6 479 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 DMP1Q13316 513 aaPredicted RBP16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 POMGNT1Q8WZA1 660 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 MFSD14AQ96MC6 490 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 KMT5AQ9NQR1 393 aa16.84■□□□□ 0.29
TSPAN4-211ENST00000468468 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.84■□□□□ 0.292e-6■■□□□ 13.6
TSPAN4-211ENST00000468468 ANGEL2Q5VTE6 544 aaKnown RBP16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 RHBDF2Q6PJF5 856 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 CCDC50Q8IVM0 306 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 RNF217Q8TC41 542 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 SNF8Q96H20 258 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 SERPINB12Q96P63 405 aa16.83■□□□□ 0.29
TSPAN4-211ENST00000468468 SGIP1Q9BQI5 828 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms