RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 ZBP1Q9H171 429 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 IKZF4Q9H2S9 585 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 TLE6Q9H808 572 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 KIAA1586Q9HCI6 787 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 ENTPD7Q9NQZ7 604 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 CHST7Q9NS84 486 aa21.79■■□□□ 1.08
NPHP4-206ENST00000468253 C2orf71A6NGG8 1288 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 XPOTO43592 962 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 EXTL3O43909 919 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 LILRB3O75022 631 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 ACOT2P49753 483 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 UBE2HP62256 183 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 PPP2R3AQ06190 1150 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 HYAL1Q12794 435 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 ELAVL2Q12926 359 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 SKIV2LQ15477 1246 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 KNOP1Q1ED39 458 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 GLRA4Q5JXX5 417 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 GOLGA5Q8TBA6 731 aa21.78■■□□□ 1.08
NPHP4-206ENST00000468253 PABPC5Q96DU9 382 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 GTPBP4Q9BZE4 634 aaKnown RBP21.78■■□□□ 1.08
NPHP4-206ENST00000468253 NLRC5Q86WI3 1866 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 CASTOR2A6NHX0 329 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 TGFB1I1O43294 461 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 GADD45BO75293 160 aaPredicted RBP21.77■■□□□ 1.08
NPHP4-206ENST00000468253 KIF20AO95235 890 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 IL18RAPO95256 599 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 ADAM15Q13444 863 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 HS2ST1Q7LGA3 356 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 NT5DC4Q86YG4 428 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 C12orf56Q8IXR9 622 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 EFHBQ8N7U6 833 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 SPATA20Q8TB22 786 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 ATXN2LQ8WWM7 1075 aaKnown RBP21.77■■□□□ 1.08
NPHP4-206ENST00000468253 GSDMAQ96QA5 445 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 PAAF1Q9BRP4 392 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 HERC2P3Q9BVR0 1158 aa21.77■■□□□ 1.08
NPHP4-206ENST00000468253 UBQLN1Q9UMX0 589 aaKnown RBP21.77■■□□□ 1.08
NPHP4-206ENST00000468253 TRAPPC3O43617 180 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 B3GAT3O94766 335 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 SMC2O95347 1197 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 PRR29P0C7W0 189 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 PAX3P23760 479 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 LRPAP1P30533 357 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 DUSP6Q16828 381 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 USP41Q3LFD5 358 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 KIAA0319Q5VV43 1072 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 PLPP4Q5VZY2 271 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 ARMCX5Q6P1M9 558 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 FUT10Q6P4F1 479 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 TMEM184AQ6ZMB5 413 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 KIAA0895Q8NCT3 520 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 FBXL18Q96ME1 805 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 CBWD1Q9BRT8 395 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 GPR62Q9BZJ7 368 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 MRPL17Q9NRX2 175 aaKnown RBP21.76■■□□□ 1.07
NPHP4-206ENST00000468253 C2CD2Q9Y426 696 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 SF3B1O75533 1304 aaKnown RBP eCLIP21.76■■□□□ 1.07
NPHP4-206ENST00000468253 PRUNE2Q8WUY3 3088 aa21.76■■□□□ 1.07
NPHP4-206ENST00000468253 HIDE1A8MVS5 230 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 KINO60870 393 aaKnown RBP21.75■■□□□ 1.07
NPHP4-206ENST00000468253 C1RP00736 705 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 CLCNKBP51801 687 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 DSG1Q02413 1049 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 SOX4Q06945 474 aaPredicted RBP21.75■■□□□ 1.07
NPHP4-206ENST00000468253 AAK1Q2M2I8 961 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 SPATA1Q5VX52 437 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 CD300LGQ6UXG3 332 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 TAS1R1Q7RTX1 841 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 ADGRD2Q7Z7M1 963 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 GPD1LQ8N335 351 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 C18orf25Q96B23 403 aaPredicted RBP21.75■■□□□ 1.07
NPHP4-206ENST00000468253 KIF12Q96FN5 646 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 FAM213AQ9BRX8 229 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 RXFP1Q9HBX9 757 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 AGPAT3Q9NRZ7 376 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 RMND1Q9NWS8 449 aa21.75■■□□□ 1.07
NPHP4-206ENST00000468253 ZNF233A6NK53 670 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 F8W810 466 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 PDXKO00764 312 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 PRPF40AO75400 957 aaKnown RBP21.74■■□□□ 1.07
NPHP4-206ENST00000468253 KIF4AO95239 1232 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 NRIP1P48552 1158 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 MYBPC2Q14324 1141 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 PTPN14Q15678 1187 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 BRSK2Q8IWQ3 736 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 NELFCDQ8IXH7 590 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 BEST2Q8NFU1 509 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 RABGGTAQ92696 567 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 EMILIN2Q9BXX0 1053 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 UBE2ZQ9H832 354 aaPredicted RBP21.74■■□□□ 1.07
NPHP4-206ENST00000468253 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.74■■□□□ 1.07
NPHP4-206ENST00000468253 HSPBP1Q9NZL4 362 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 THEGQ9P2T0 379 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 PCDHGC5Q9Y5F6 944 aa21.74■■□□□ 1.07
NPHP4-206ENST00000468253 PODXLO00592 558 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 URODP06132 367 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 MRPS5P82675 430 aaKnown RBP21.73■■□□□ 1.07
NPHP4-206ENST00000468253 PNOCQ13519 176 aa21.73■■□□□ 1.07
NPHP4-206ENST00000468253 KCNC3Q14003 757 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms