RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 EMILIN2Q9BXX0 1053 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 TRIM9Q9C026 710 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 GOLGA2P5Q9HBQ8 144 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 SLC38A7Q9NVC3 462 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 FNIP2Q9P278 1114 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 SCN1AP35498 2009 aa16.56■□□□□ 0.24
ATG4B-215ENST00000468018 ANKRD63C9JTQ0 380 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 OGTO15294 1046 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 TEX28O15482 410 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 TADA2AO75478 443 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 CLTAP09496 248 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 CXCL8P10145 99 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 HARSP12081 509 aaKnown RBP16.55■□□□□ 0.24
ATG4B-215ENST00000468018 TNFSF9P41273 254 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 ME1P48163 572 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 CASP5P51878 434 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 ELAVL2Q12926 359 aaKnown RBP16.55■□□□□ 0.24
ATG4B-215ENST00000468018 ZBTB6Q15916 424 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 KYAT1Q16773 422 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 RTP2Q5QGT7 225 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 ZBTB41Q5SVQ8 909 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 DCLRE1AQ6PJP8 1040 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
ATG4B-215ENST00000468018 BICD1Q96G01 975 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 CHAMP1Q96JM3 812 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 B3GALT6Q96L58 329 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 FGFBP2Q9BYJ0 223 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 MAGEF1Q9HAY2 307 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.55■□□□□ 0.24
ATG4B-215ENST00000468018 DZANK1Q9NVP4 752 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 CPSF3Q9UKF6 684 aaKnown RBP16.55■□□□□ 0.24
ATG4B-215ENST00000468018 DOCK8Q8NF50 2099 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 MYO10Q9HD67 2058 aa16.55■□□□□ 0.24
ATG4B-215ENST00000468018 TISP43B9A030 160 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 FGFR3P22607 806 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 ADSSP30520 456 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 CA8P35219 290 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 POU5F1Q01860 360 aaKnown RBP16.54■□□□□ 0.24
ATG4B-215ENST00000468018 ITIH3Q06033 890 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 EHHADHQ08426 723 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 KCNA1Q09470 495 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 ENOX2Q16206 610 aaKnown RBP16.54■□□□□ 0.24
ATG4B-215ENST00000468018 L1TD1Q5T7N2 865 aaKnown RBP16.54■□□□□ 0.24
ATG4B-215ENST00000468018 ADALQ6DHV7 355 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 GJD3Q8N144 294 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 HASPINQ8TF76 798 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 PIK3R5Q8WYR1 880 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 STAMQ92783 540 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 KHSRPQ92945 711 aaKnown RBP eCLIP16.54■□□□□ 0.243e-7■■□□□ 12.3
ATG4B-215ENST00000468018 DHX58Q96C10 678 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 DDX27Q96GQ7 796 aaKnown RBP16.54■□□□□ 0.24
ATG4B-215ENST00000468018 C7orf25Q9BPX7 421 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 LRRC27Q9C0I9 530 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 ADAM7Q9H2U9 754 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 MRPL44Q9H9J2 332 aaKnown RBP16.54■□□□□ 0.24
ATG4B-215ENST00000468018 PANK4Q9NVE7 773 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 TSC2P49815 1807 aa16.54■□□□□ 0.24
ATG4B-215ENST00000468018 FAM237AA0A1B0GTK4 181 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 C2CD2LO14523 706 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 POLR2DO15514 142 aaKnown RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 B3GAT3O94766 335 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 ADH1AP07327 375 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 CYP3A5P20815 502 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 KLRC2P26717 231 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 LRPAP1P30533 357 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 RPL9P32969 192 aaKnown RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 KRT85P78386 507 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 ALCAMQ13740 583 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 BECN1Q14457 450 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 CBX2Q14781 532 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 TPRNQ4KMQ1 711 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 HERC4Q5GLZ8 1057 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 LILRA6Q6PI73 481 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 LNX1Q8TBB1 728 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 TSPAN18Q96SJ8 248 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 TTPALQ9BTX7 342 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 MSTO1Q9BUK6 570 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 PHF7Q9BWX1 381 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 RHOBTB2Q9BYZ6 727 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 IKZF4Q9H2S9 585 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 HPSEQ9Y251 543 aa16.53■□□□□ 0.24
ATG4B-215ENST00000468018 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.53■□□□□ 0.24
ATG4B-215ENST00000468018 LOC730098B7Z3J9 87 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 PODXLO00592 558 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 MYBP10242 640 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 IDEP14735 1019 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 AMPD3Q01432 767 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 CREMQ03060 361 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 FAM171A1Q5VUB5 890 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 SLFN12LQ6IEE8 588 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 KIAA1841Q6NSI8 718 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 PRSS55Q6UWB4 352 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-215ENST00000468018 CRELD2Q6UXH1 353 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-215ENST00000468018 CCDC65Q8IXS2 484 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 FEZF2Q8TBJ5 459 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 RIN2Q8WYP3 895 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-215ENST00000468018 FBXL18Q96ME1 805 aa16.52■□□□□ 0.24
ATG4B-215ENST00000468018 POP1Q99575 1024 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms