RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 FGD1P98174 961 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 NCBP1Q09161 790 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 LAMTOR4Q0VGL1 99 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 ELAVL2Q12926 359 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 TUSC3Q13454 348 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 UAP1L1Q3KQV9 507 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 PLK5Q496M5 336 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 TXNDC11Q6PKC3 985 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 REXO1Q8N1G1 1221 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 RNF149Q8NC42 400 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 GSTCDQ8NEC7 633 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 RDM1Q8NG50 284 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 EXOC6Q8TAG9 804 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 TMEM143Q96AN5 459 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 ZC3H10Q96K80 434 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 RIT2Q99578 217 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 MKNK1Q9BUB5 465 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 RBM28Q9NW13 759 aaKnown RBP11.4□□□□□ -0.58
HDAC3-203ENST00000467533 MTRRQ9UBK8 725 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 PARP2Q9UGN5 583 aa11.4□□□□□ -0.58
HDAC3-203ENST00000467533 ZMYM2Q9UBW7 1377 aa11.4□□□□□ -0.59
HDAC3-203ENST00000467533 CCDC163A0A0D9SF12 145 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 HEPACAM2A8MVW5 462 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 SPECC1L-ADORA2AF8WAN1 911 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 LOC400499M0QZD8 3231 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 ARNTLO00327 626 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 PRRG1O14668 218 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 NPTXRO95502 500 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 ELF1P32519 619 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 CTHP32929 405 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 CIITAP33076 1130 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 LIFRP42702 1097 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 HDAC1Q13547 482 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-203ENST00000467533 PON2Q15165 354 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 SYNE3Q6ZMZ3 975 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 ANO5Q75V66 913 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 MFSD6LQ8IWD5 586 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 TTC8Q8TAM2 541 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 ZSCAN18Q8TBC5 510 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-203ENST00000467533 NUP205Q92621 2012 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 SLC5A5Q92911 643 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 GJA10Q969M2 543 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 ZSWIM3Q96MP5 696 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 BBC3Q96PG8 261 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-203ENST00000467533 LRRC2Q9BYS8 371 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 SLITRK6Q9H5Y7 841 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 SLC8A2Q9UPR5 921 aa11.39□□□□□ -0.59
HDAC3-203ENST00000467533 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
HDAC3-203ENST00000467533 HELZ2Q9BYK8 2649 aaKnown RBP11.39□□□□□ -0.59
HDAC3-203ENST00000467533 MYBPHLA2RUH7 354 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 INO80B-WBP1J3KQ70 363 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 ADAMTS3O15072 1205 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 RHOBTB1O94844 696 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 MICAL2O94851 1124 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 CCR2P41597 374 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 NPEPPSP55786 919 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 SPIRE1Q08AE8 756 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 CCINQ13939 588 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 RTN1Q16799 776 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 CYP4A22Q5TCH4 519 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 PKN3Q6P5Z2 889 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 RALGPS2Q86X27 583 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-203ENST00000467533 SYNPOQ8N3V7 929 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 ADAM32Q8TC27 787 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 RUFY2Q8WXA3 655 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 CCDC136Q96JN2 1154 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 DUSP15Q9H1R2 295 aaPredicted RBP11.38□□□□□ -0.59
HDAC3-203ENST00000467533 SLC32A1Q9H598 525 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 C6orf50Q9HD87 102 aa11.38□□□□□ -0.59
HDAC3-203ENST00000467533 ARHGEF37A1IGU5 675 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 BCLAF3A2AJT9 711 aaKnown RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 KHNYNO15037 678 aaKnown RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 CHADO15335 359 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 MYL4P12829 197 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 GJA1P17302 382 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 KARSQ15046 597 aaKnown RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 PCBP1Q15365 356 aaKnown RBP eCLIP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 CHD1LQ86WJ1 897 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 CDR2LQ86X02 465 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 EXOC8Q8IYI6 725 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 ELMOD1Q8N336 334 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 TCP11Q8WWU5 503 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 E2F7Q96AV8 911 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 CEP170P1Q96L14 293 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 TRPV4Q9HBA0 871 aa11.37□□□□□ -0.59
HDAC3-203ENST00000467533 NUP210Q8TEM1 1887 aaPredicted RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 SMG1Q96Q15 3661 aaKnown RBP11.37□□□□□ -0.59
HDAC3-203ENST00000467533 SPAARA0A1B0GVQ0 90 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 ESYT2A0FGR8 921 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 ASAP2O43150 1006 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 PSMD10O75832 226 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 PRKCBP05771 671 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 ARF4P18085 180 aaPredicted RBP11.36□□□□□ -0.59
HDAC3-203ENST00000467533 FGFR3P22607 806 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 GBP1P32455 592 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 RFC5P40937 340 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 PSMC5P62195 406 aa11.36□□□□□ -0.59
HDAC3-203ENST00000467533 ROR1Q01973 937 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms