RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	NENF	Q9UMX5	172 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	GINS2	Q9Y248	185 aa		13.26	□□□□□ -0.29
HDLBP-231	ENST00000467435	DDX3X	O00571	662 aa	Known RBP eCLIP	13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	TNNC2	P02585	160 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	TMEM191B	P0C7N4	346 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	FGFR4	P22455	802 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	YY1	P25490	414 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	NOP14	P78316	857 aa	Known RBP	13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	ZNF200	P98182	395 aa	Predicted RBP	13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	NAB2	Q15742	525 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	KYAT1	Q16773	422 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	DCAF4L1	Q3SXM0	396 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	C10orf76	Q5T2E6	689 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	CXCL17	Q6UXB2	119 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	CATSPER4	Q7RTX7	472 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	APBB1IP	Q7Z5R6	666 aa	Predicted RBP	13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	EFCAB13	Q8IY85	973 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	OLIG1	Q8TAK6	271 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	NAPG	Q99747	312 aa	Predicted RBP	13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	SYT11	Q9BT88	431 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	L2HGDH	Q9H9P8	463 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435	NAGPA	Q9UK23	515 aa		13.25	□□□□□ -0.29
HDLBP-231	ENST00000467435		A0A1B0GUA9	196 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	CTAGE9	A4FU28	777 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	B4GALT4	O60513	344 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	CLTA	P09496	248 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	STAG3L1	P0CL83	205 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	DARS	P14868	501 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	TNFAIP3	P21580	790 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	TFAM	Q00059	246 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	POU5F1	Q01860	360 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	NCOA4	Q13772	614 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	PCBP1	Q15365	356 aa	Known RBP eCLIP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	SPOPL	Q6IQ16	392 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	ALKBH5	Q6P6C2	394 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	TMEM192	Q8IY95	271 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	FAM71A	Q8IYT1	594 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	RAET1E	Q8TD07	263 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	U2AF1L4	Q8WU68	220 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLC20A1	Q8WUM9	679 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	DHX38	Q92620	1227 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	ERO1A	Q96HE7	468 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	ANKRD36BP1	Q96IX9	119 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	AGPAT1	Q99943	283 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	PACSIN1	Q9BY11	444 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	IMPG2	Q9BZV3	1241 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	APOBEC3G	Q9HC16	384 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	SEPT11	Q9NVA2	429 aa	Known RBP	13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	GTF2IRD1	Q9UHL9	959 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	DUSP10	Q9Y6W6	482 aa		13.24	□□□□□ -0.29
HDLBP-231	ENST00000467435	TRIP11	Q15643	1979 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	MROH7	Q68CQ1	1323 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	CYP26A1	O43174	497 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	TACC1	O75410	805 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	MOCS3	O95396	460 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NPTXR	O95502	500 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	GNRH1	P01148	92 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NFIC	P08651	508 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	KRT5	P13647	590 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	TBXAS1	P24557	533 aa	Predicted RBP	13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	CST5	P28325	142 aa	Predicted RBP	13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	PDE6C	P51160	858 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NCBP1	Q09161	790 aa	Known RBP	13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	CUL2	Q13617	745 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	SNX17	Q15036	470 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	DUOXA2	Q1HG44	320 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NBPF20	Q3BBV1	942 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	MAP3K21	Q5TCX8	1036 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	TAF2	Q6P1X5	1199 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NOTUM	Q6P988	496 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	TRAPPC11	Q7Z392	1133 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	NOP9	Q86U38	636 aa	Known RBP	13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	GLYCTK	Q8IVS8	523 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	ZNF710	Q8N1W2	664 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLC30A5	Q8TAD4	765 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	EPS8L1	Q8TE68	723 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	ALS2CR12	Q96Q35	445 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	ARID3A	Q99856	593 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	CDHR5	Q9HBB8	845 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	CAPN6	Q9Y6Q1	641 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	MYH10	P35580	1976 aa		13.23	□□□□□ -0.29
HDLBP-231	ENST00000467435	UMODL1	Q5DID0	1318 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	LACTBL1	A8MY62	500 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	MEFV	O15553	781 aa	Predicted RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLU7	O95391	586 aa	Known RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	SGPL1	O95470	568 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	ASS1	P00966	412 aa	Known RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	MYCN	P04198	464 aa	Predicted RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	ASGR1	P07306	291 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	H2AFZ	P0C0S5	128 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	EIF4B	P23588	611 aa	Known RBP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	GRM5	P41594	1212 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	TRPC3	Q13507	836 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	FAM47C	Q5HY64	1035 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	TAF3	Q5VWG9	929 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLC27A1	Q6PCB7	646 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	H2AFV	Q71UI9	128 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	SLC47A2	Q86VL8	602 aa		13.22	□□□□□ -0.29
HDLBP-231	ENST00000467435	RPUSD2	Q8IZ73	545 aa	Known RBP	13.22	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms