RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 TEX35Q5T0J7 233 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 C10orf62Q5T681 223 aaPredicted RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 ANKRD34AQ69YU3 496 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 FDX2Q6P4F2 183 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 C17orf99Q6UX52 265 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 DPP8Q6V1X1 898 aaPredicted RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 LBX2Q6XYB7 198 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 USP53Q70EK8 1073 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ZC3H7AQ8IWR0 971 aaKnown RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 REXO1L1PQ8IX06 675 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 C17orf53Q8N3J3 647 aaPredicted RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 FBXL6Q8N531 539 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ENGASEQ8NFI3 743 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 NPLOC4Q8TAT6 608 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 GOLGA5Q8TBA6 731 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ANKS1AQ92625 1134 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 RPGRQ92834 1020 aaKnown RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 SLC5A5Q92911 643 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ISL2Q96A47 359 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 FAXDC2Q96IV6 333 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 TACO1Q9BSH4 297 aaKnown RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 LRRCC1Q9C099 1032 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 NUP62CLQ9H1M0 184 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 PRDM12Q9H4Q4 367 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ZSCAN16Q9H4T2 348 aaPredicted RBP3.86□□□□□ -1.79
SORT1-202ENST00000466471 PIDD1Q9HB75 910 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 FAM86C1Q9NVL1 165 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 KLHL11Q9NVR0 708 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 TAGLN3Q9UI15 199 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 RCOR1Q9UKL0 485 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 OGDHLQ9ULD0 1010 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 CNPY2Q9Y2B0 182 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 SNX14Q9Y5W7 946 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 ITPR1Q14643 2758 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 COL4A3Q01955 1670 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 TTC41PQ6P2S7 1318 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 HECTD1Q9ULT8 2610 aa3.86□□□□□ -1.79
SORT1-202ENST00000466471 IGF2RP11717 2491 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ARAP2Q8WZ64 1704 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 FAM237AA0A1B0GTK4 181 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 A0A1W2PQ27 194 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 A0A1W2PQ64 194 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 A0A1W2PQD8 194 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 PRR23AA6NEV1 266 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 MEFVO15553 781 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 SIGLEC6O43699 453 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 GAS2O43903 313 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 DHX16O60231 1041 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 TADA3O75528 432 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 TIAF1O95411 115 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 STARD3NLO95772 234 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 CKMP06732 381 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ASGR2P07307 311 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 IVLP07476 585 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ENDOUP21128 410 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 AK2P54819 239 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 IRX3P78415 501 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 BTKQ06187 659 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 SOX4Q06945 474 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 TTLL4Q14679 1199 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ANKRD1Q15327 319 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ABCB5Q2M3G0 1257 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 TMEM177Q53S58 311 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 SGO2Q562F6 1265 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 PRR16Q569H4 304 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 FAM83BQ5T0W9 1011 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ICE2Q659A1 982 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ERAP2Q6P179 960 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ZNF530Q6P9A1 599 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 ABHD17CQ6PCB6 329 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 TRIM65Q6PJ69 517 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 C16orf59Q7L2K0 433 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 RSRC2Q7L4I2 434 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 ARMCX6Q7L4S7 300 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 DGLUCYQ7Z3D6 616 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 SRLQ86TD4 932 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 RASSF3Q86WH2 238 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 TPH2Q8IWU9 490 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 PPIL6Q8IXY8 311 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 AMOTL1Q8IY63 956 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 SMYD4Q8IYR2 804 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 ABI1Q8IZP0 508 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 IGSF22Q8N9C0 903 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 CCDC150Q8NCX0 1101 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 AGBL3Q8NEM8 1001 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 MAP4K1Q92918 833 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 ZKSCAN4Q969J2 545 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 TIFAQ96CG3 184 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 RBM17Q96I25 401 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 CHAMP1Q96JM3 812 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 FAM193BQ96PV7 902 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 MMP19Q99542 508 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 MPHOSPH8Q99549 860 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 MEIS3Q99687 375 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 NCAPGQ9BPX3 1015 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 DPH2Q9BQC3 489 aaPredicted RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 LLPHQ9BRT6 129 aaKnown RBP3.85□□□□□ -1.79
SORT1-202ENST00000466471 AGXT2Q9BYV1 514 aa3.85□□□□□ -1.79
SORT1-202ENST00000466471 NOL6Q9H6R4 1146 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms