RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 GLP2RO95838 553 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 KCNA5P22460 613 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 HOXD13P35453 343 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 KCNQ1P51787 676 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 RBM10P98175 930 aaKnown RBP28.24■■■□□ 2.11
SMC4-206ENST00000465903 PTPN14Q15678 1187 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 FUT10Q6P4F1 479 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 EP400NLQ6ZTU2 488 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 VN1R2Q8NFZ6 395 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 ZNF507Q8TCN5 953 aa28.24■■■□□ 2.11
SMC4-206ENST00000465903 CDCA3Q99618 268 aaPredicted RBP28.24■■■□□ 2.11
SMC4-206ENST00000465903 AGO2Q9UKV8 859 aaKnown RBP28.24■■■□□ 2.11
SMC4-206ENST00000465903 LACTBL1A8MY62 500 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 TBX10O75333 385 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 TADA2AO75478 443 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 ZNF202O95125 648 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 CLCNKBP51801 687 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 ZBTB6Q15916 424 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 UPP1Q16831 310 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 LEXMQ3ZCV2 418 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 CRELD2Q6UXH1 353 aaPredicted RBP28.23■■■□□ 2.11
SMC4-206ENST00000465903 KRBA2Q6ZNG9 492 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 C18orf25Q96B23 403 aaPredicted RBP28.23■■■□□ 2.11
SMC4-206ENST00000465903 TMEM206Q9H813 350 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 CHST7Q9NS84 486 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 SLC38A7Q9NVC3 462 aa28.23■■■□□ 2.11
SMC4-206ENST00000465903 H3BQ06 376 aaPredicted RBP28.22■■■□□ 2.11
SMC4-206ENST00000465903 CLASP2O75122 1294 aaKnown RBP28.22■■■□□ 2.11
SMC4-206ENST00000465903 ACOT2P49753 483 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 SPAG1Q07617 926 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 BMS1Q14692 1282 aaKnown RBP28.22■■■□□ 2.11
SMC4-206ENST00000465903 POSTNQ15063 836 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 KIAA0319Q5VV43 1072 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 DCLRE1AQ6PJP8 1040 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 SYCP3Q8IZU3 236 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 TMEM130Q8N3G9 435 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 ZSWIM2Q8NEG5 633 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 GADD45GIP1Q8TAE8 222 aaPredicted RBP28.22■■■□□ 2.11
SMC4-206ENST00000465903 HASPINQ8TF76 798 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 POMGNT1Q8WZA1 660 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 UROC1Q96N76 676 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 RPF1Q9H9Y2 349 aaKnown RBP28.22■■■□□ 2.11
SMC4-206ENST00000465903 CHMP5Q9NZZ3 219 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 CLEC1BQ9P126 229 aa28.22■■■□□ 2.11
SMC4-206ENST00000465903 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP28.21■■■□□ 2.11
SMC4-206ENST00000465903 TMEM189-UBE2V1I3L0A0 370 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 EIF3DO15371 548 aaKnown RBP eCLIP28.21■■■□□ 2.11
SMC4-206ENST00000465903 PRR29P0C7W0 189 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 BMP1P13497 986 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 AAK1Q2M2I8 961 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 TJAP1Q5JTD0 557 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 STXBP4Q6ZWJ1 553 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 C3orf58Q8NDZ4 430 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 SCFD1Q8WVM8 642 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 SLC39A2Q9NP94 309 aa28.21■■■□□ 2.11
SMC4-206ENST00000465903 GARTP22102 1010 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 CA8P35219 290 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 DSG1Q02413 1049 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 KMT5BQ4FZB7 885 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 TMEM184AQ6ZMB5 413 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 FMR1NBQ8N0W7 255 aaPredicted RBP28.2■■■□□ 2.1
SMC4-206ENST00000465903 ENGASEQ8NFI3 743 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 B3GALT6Q96L58 329 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 KLHL5Q96PQ7 755 aa28.2■■■□□ 2.1
SMC4-206ENST00000465903 MRPL17Q9NRX2 175 aaKnown RBP28.2■■■□□ 2.1
SMC4-206ENST00000465903 MTCL1Q9Y4B5 1905 aaKnown RBP28.2■■■□□ 2.1
SMC4-206ENST00000465903 PLXNA3P51805 1871 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 MYL1P05976 194 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 GLUD2P49448 558 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 PPP2R3AQ06190 1150 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 USP41Q3LFD5 358 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 DDX27Q96GQ7 796 aaKnown RBP28.19■■■□□ 2.1
SMC4-206ENST00000465903 MSLNLQ96KJ4 702 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 CBWD1Q9BRT8 395 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 TUBGCP4Q9UGJ1 667 aa28.19■■■□□ 2.1
SMC4-206ENST00000465903 BARX2Q9UMQ3 279 aaPredicted RBP28.19■■■□□ 2.1
SMC4-206ENST00000465903 C2CD2LO14523 706 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 URODP06132 367 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 CNPP09543 421 aaKnown RBP28.18■■■□□ 2.1
SMC4-206ENST00000465903 NDUFV1P49821 464 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 POU5F1Q01860 360 aaKnown RBP28.18■■■□□ 2.1
SMC4-206ENST00000465903 STK4Q13043 487 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 SNW1Q13573 536 aaKnown RBP28.18■■■□□ 2.1
SMC4-206ENST00000465903 CD302Q8IX05 232 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 KIF12Q96FN5 646 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 RXFP1Q9HBX9 757 aa28.18■■■□□ 2.1
SMC4-206ENST00000465903 SF3B1O75533 1304 aaKnown RBP eCLIP28.18■■■□□ 2.1
SMC4-206ENST00000465903 FSD2A1L4K1 749 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 GOLGA6L4A6NEF3 574 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 PODXLO00592 558 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 TGFB1I1O43294 461 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 B3GAT3O94766 335 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 RPL9P32969 192 aaKnown RBP28.17■■■□□ 2.1
SMC4-206ENST00000465903 DPYDQ12882 1025 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 BMT2Q1RMZ1 405 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 KIAA0895Q8NCT3 520 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 SLC22A17Q8WUG5 538 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 FAM212AQ96EL1 285 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 SAAL1Q96ER3 474 aa28.17■■■□□ 2.1
SMC4-206ENST00000465903 TSPAN18Q96SJ8 248 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms