RNA–Protein interactions for RNA: ENST00000465282.5

USP39-211, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-211ENST00000465282 FOXR2Q6PJQ5 311 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 Q7L0L9 218 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 SPRED2Q7Z698 418 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 BRSK2Q8IWQ3 736 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 ADSSL1Q8N142 457 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 SAAL1Q96ER3 474 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 DHTKD1Q96HY7 919 aaPredicted RBP18.41■□□□□ 0.54
USP39-211ENST00000465282 FAM161BQ96MY7 647 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 ZMAT2Q96NC0 199 aaKnown RBP18.41■□□□□ 0.54
USP39-211ENST00000465282 DMAC2Q9NW81 257 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 RBAKQ9NYW8 714 aaPredicted RBP18.41■□□□□ 0.54
USP39-211ENST00000465282 MAPK8IP1Q9UQF2 711 aa18.41■□□□□ 0.54
USP39-211ENST00000465282 CLIC2O15247 247 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 MEFVO15553 781 aaPredicted RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 ITGB1P05556 798 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 OR1G1P47890 313 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 SNRNP35Q16560 246 aaKnown RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 PDE12Q6L8Q7 609 aaKnown RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 SMYD4Q8IYR2 804 aaPredicted RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 SPPL3Q8TCT6 385 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 KIF12Q96FN5 646 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 IGSF21Q96ID5 467 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 CDX2Q99626 313 aaPredicted RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 CXCL16Q9H2A7 254 aa18.4■□□□□ 0.54
USP39-211ENST00000465282 UBQLN1Q9UMX0 589 aaKnown RBP18.4■□□□□ 0.54
USP39-211ENST00000465282 EPOPA6NHQ4 379 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 TMEM189-UBE2V1I3L0A0 370 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 MAPK13O15264 365 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 B4GALT3O60512 393 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 EXOC3O60645 756 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 LPXNO60711 386 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 NR3C1P04150 777 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 PAX3P23760 479 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 CYP2J2P51589 502 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 LRRC63Q05C16 580 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 BMS1Q14692 1282 aaKnown RBP18.39■□□□□ 0.53
USP39-211ENST00000465282 ZCWPW2Q504Y3 356 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 GLRA4Q5JXX5 417 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 DDX53Q86TM3 631 aaKnown RBP18.39■□□□□ 0.53
USP39-211ENST00000465282 CACTINQ8WUQ7 758 aaKnown RBP18.39■□□□□ 0.53
USP39-211ENST00000465282 MRPL38Q96DV4 380 aaKnown RBP18.39■□□□□ 0.53
USP39-211ENST00000465282 FAM212AQ96EL1 285 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 TSG101Q99816 390 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 FRMD4BQ9Y2L6 1034 aa18.39■□□□□ 0.53
USP39-211ENST00000465282 GOLGA8IPA6NC78 632 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 GOLGA8JA6NMD2 632 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 BMP6P22004 513 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 TMEM132DQ14C87 1099 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 UPP1Q16831 310 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 SPATA1Q5VX52 437 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 ISM2Q6H9L7 571 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 JADE1Q6IE81 842 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 DCLRE1AQ6PJP8 1040 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 RBM43Q6ZSC3 357 aaKnown RBP18.38■□□□□ 0.53
USP39-211ENST00000465282 MLKLQ8NB16 471 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 BEST2Q8NFU1 509 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 GDPD5Q8WTR4 605 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 GUCD1Q96NT3 240 aa18.38■□□□□ 0.53
USP39-211ENST00000465282 BICDL2A1A5D9 508 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 CASTOR2A6NHX0 329 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 NT5C1B-RDH14C9J2C7 533 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 BIN1O00499 593 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 GRM6O15303 877 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 TADA2AO75478 443 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 NR2F2P24468 414 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 CCNE1P24864 410 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 LRPAP1P30533 357 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 PBX3P40426 434 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 FKBP3Q00688 224 aaKnown RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 ENPEPQ07075 957 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 ELAVL2Q12926 359 aaKnown RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 USP37Q86T82 979 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 CBWD2Q8IUF1 395 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 ZSWIM2Q8NEG5 633 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 NOC3LQ8WTT2 800 aaKnown RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 POF1BQ8WVV4 589 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 SYAP1Q96A49 352 aaPredicted RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 ALG13Q9NP73 1137 aaKnown RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 TLR9Q9NR96 1032 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 ADAM28Q9UKQ2 775 aa18.37■□□□□ 0.53
USP39-211ENST00000465282 PRG3Q9Y2Y8 225 aaPredicted RBP18.37■□□□□ 0.53
USP39-211ENST00000465282 PPP1R3GB7ZBB8 358 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 RFXAPO00287 272 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 TRAPPC3O43617 180 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 SOX4Q06945 474 aaPredicted RBP18.36■□□□□ 0.53
USP39-211ENST00000465282 CYP24A1Q07973 514 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 ADAM9Q13443 819 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 PSMD6Q15008 389 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 CT47A1Q5JQC4 288 aaPredicted RBP18.36■□□□□ 0.53
USP39-211ENST00000465282 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 GPR65Q8IYL9 337 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 RDH13Q8NBN7 331 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 C18orf25Q96B23 403 aaPredicted RBP18.36■□□□□ 0.53
USP39-211ENST00000465282 MKNK1Q9BUB5 465 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 NGRNQ9NPE2 291 aaKnown RBP18.36■□□□□ 0.53
USP39-211ENST00000465282 MARCH5Q9NX47 278 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 DACH1Q9UI36 760 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 SSX2IPQ9Y2D8 614 aa18.36■□□□□ 0.53
USP39-211ENST00000465282 SF3B1O75533 1304 aaKnown RBP eCLIP18.35■□□□□ 0.533e-9■■■■■ 206.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms