RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 FAM71AQ8IYT1 594 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 SYT15Q9BQS2 421 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 DCLK3Q9C098 648 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 DENND2DQ9H6A0 471 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 TOPORSQ9NS56 1045 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 SPATS2LQ9NUQ6 558 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 WDR91A4D1P6 747 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 FAM47DPA6NHR8 397 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CDH16O75309 829 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 ZSCAN5DPP0CG00 497 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 RPA3P35244 121 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CCNG1P51959 295 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 PKN2Q16513 984 aaKnown RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 NFIL3Q16649 462 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 CERKLQ49MI3 558 aaPredicted RBP13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 RFWD3Q6PCD5 774 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 MAML1Q92585 1016 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 TXLNGQ9NUQ3 528 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 LRRC42Q9Y546 428 aa13.41□□□□□ -0.26
CLCNKA-204ENST00000464764 GAS7O60861 476 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 AP1G2O75843 785 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 ASMTLO95671 621 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 NDUFB10O96000 172 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 RALAP11233 206 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 GCAP28676 217 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 MAPK4P31152 587 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 PTDSS1P48651 473 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 IL9RQ01113 521 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 SETDB1Q15047 1291 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 STK32AQ8WU08 396 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 RAB3IPQ96QF0 476 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 LRMDAQ9H2I8 198 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 UNC45AQ9H3U1 944 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 KLHL11Q9NVR0 708 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 MTA2O94776 668 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 HLA-DOAP06340 250 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 ADRB2P07550 413 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 GZMAP12544 262 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 ETS1P14921 441 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 MXI1P50539 228 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 MTM1Q13496 603 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 PTK6Q13882 451 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 SLC1A5Q15758 541 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 C11orf91Q3C1V1 193 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 IZUMO3Q5VZ72 239 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 APOBEC3HQ6NTF7 200 aaKnown RBP13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 CBWD2Q8IUF1 395 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 LXNQ9BS40 222 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 PI4K2AQ9BTU6 479 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 TRAIPQ9BWF2 469 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 CYP39A1Q9NYL5 469 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 CCNL1Q9UK58 526 aaPredicted RBP13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 ZBTB21Q9ULJ3 1066 aa13.4□□□□□ -0.26
CLCNKA-204ENST00000464764 A0A1W2PPM1 405 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 ICA1Q05084 483 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 CETN1Q12798 172 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 MOGSQ13724 837 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 TCEAL1Q15170 157 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 TAF1BQ53T94 588 aaPredicted RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 UCMAQ8WVF2 138 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 RBM15Q96T37 977 aaKnown RBP eCLIP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 METTL5Q9NRN9 209 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 HSPBP1Q9NZL4 362 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 GTF3C4Q9UKN8 822 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 ADGRA3Q8IWK6 1321 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 ARHGEF35A5YM69 484 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 BANF1O75531 89 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SKIV2L2P42285 1042 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 OVGP1Q12889 678 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 MKRN3Q13064 507 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 ACVR2BQ13705 512 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 KHDC1Q4VXA5 237 aaKnown RBP13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 PLEKHG4Q58EX7 1191 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SAYSD1Q9NPB0 183 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 GPRC5CQ9NQ84 441 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 LGALS13Q9UHV8 139 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 DCTN4Q9UJW0 460 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 MYH11P35749 1972 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SPATA31A5Q5VU36 1347 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SPATA31A6Q5VVP1 1343 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 SPATA31A7Q8IWB4 1347 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 EP400Q96L91 3159 aa13.39□□□□□ -0.27
CLCNKA-204ENST00000464764 EXOC1LA0A1B0GW35 172 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 MAGEA4P43358 317 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 PPP1R21Q6ZMI0 780 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ATL2Q8NHH9 583 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 NACC1Q96RE7 527 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 STRA6Q9BX79 667 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 FHDC1Q9C0D6 1143 aaPredicted RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 KIAA1586Q9HCI6 787 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 ALG13Q9NP73 1137 aaKnown RBP13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 EURLQ9NYK6 297 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 MAPK13O15264 365 aa13.38□□□□□ -0.27
CLCNKA-204ENST00000464764 GAS8O95995 478 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms