RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TADA2AO75478 443 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 KIF20AO95235 890 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 SLC34A2O95436 690 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 IRS1P35568 1242 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 SPAG1Q07617 926 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 BMS1Q14692 1282 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 TMC7Q7Z402 723 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 VPS52Q8N1B4 723 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 GPD1LQ8N335 351 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 ZSWIM2Q8NEG5 633 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 SPATA20Q8TB22 786 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 ERCC4Q92889 916 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 SMARCE1Q969G3 411 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 C18orf25Q96B23 403 aaPredicted RBP15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 KIF12Q96FN5 646 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 DDX27Q96GQ7 796 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 UROC1Q96N76 676 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 TCF25Q9BQ70 676 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 GOLGA2P5Q9HBQ8 144 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 ENTPD7Q9NQZ7 604 aa15.78■□□□□ 0.12
SQSTM1-205ENST00000464493 GOLGA8IPA6NC78 632 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 GOLGA8JA6NMD2 632 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 FSCN2O14926 492 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 CLIC2O15247 247 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 RPL9P32969 192 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 CLCNKBP51801 687 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 SOX4Q06945 474 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 ZBTB6Q15916 424 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 UPP1Q16831 310 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 TCEAL5Q5H9L2 206 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 DCLRE1AQ6PJP8 1040 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 GOLGA5Q8TBA6 731 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 NOC3LQ8WTT2 800 aaKnown RBP15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 VN1R3Q9BXE9 311 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 ASB7Q9H672 318 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 LMBRD1Q9NUN5 540 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 HSPBP1Q9NZL4 362 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 ADAM28Q9UKQ2 775 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 MAPK8IP1Q9UQF2 711 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 PCDHGC5Q9Y5F6 944 aa15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.77■□□□□ 0.12
SQSTM1-205ENST00000464493 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.11
SQSTM1-205ENST00000464493 PRUNE2Q8WUY3 3088 aa15.77■□□□□ 0.11
SQSTM1-205ENST00000464493 ATG2AQ2TAZ0 1938 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 ZNF233A6NK53 670 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 XPOTO43592 962 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 B3GAT3O94766 335 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 KIF4AO95239 1232 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 IL18RAPO95256 599 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 CXCL14O95715 111 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 CYP3A5P20815 502 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 SMC1AQ14683 1233 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 SKIV2LQ15477 1246 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 PLPP4Q5VZY2 271 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 JADE1Q6IE81 842 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 TAS1R1Q7RTX1 841 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 C12orf56Q8IXR9 622 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 GUF1Q8N442 669 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 PPP2R3CQ969Q6 453 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 ZBP1Q9H171 429 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 KCTD10Q9H3F6 313 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 KIAA1586Q9HCI6 787 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 RBAKQ9NYW8 714 aaPredicted RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 UBQLN1Q9UMX0 589 aaKnown RBP15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 DERAQ9Y315 318 aa15.76■□□□□ 0.11
SQSTM1-205ENST00000464493 GOLGA6L22H0YM25 854 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 TMEM189-UBE2V1I3L0A0 370 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 TULP1O00294 542 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 PODXLO00592 558 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 PDXKO00764 312 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 EFEMP2O95967 443 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 SOD2P04179 222 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 CTSAP10619 480 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 CYP2J2P51589 502 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 TMEM132DQ14C87 1099 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 ZNF658Q5TYW1 1059 aaPredicted RBP15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 FUT10Q6P4F1 479 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 BRSK2Q8IWQ3 736 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 MRPL43Q8N983 215 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 XXYLT1Q8NBI6 393 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 HASPINQ8TF76 798 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 FBXL18Q96ME1 805 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 GTPBP4Q9BZE4 634 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 GPR62Q9BZJ7 368 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 TLE6Q9H808 572 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 TUBGCP4Q9UGJ1 667 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 C2CD2Q9Y426 696 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 ANK1P16157 1881 aa15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 SPTBN5Q9NRC6 3674 aaKnown RBP15.75■□□□□ 0.11
SQSTM1-205ENST00000464493 SF3B1O75533 1304 aaKnown RBP eCLIP15.74■□□□□ 0.118e-6■■□□□ 12.1
SQSTM1-205ENST00000464493 HIDE1A8MVS5 230 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 CALUO43852 315 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 NFICP08651 508 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 IGFBP6P24592 240 aaPredicted RBP15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 LRPAP1P30533 357 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 CA8P35219 290 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 CAMK4Q16566 473 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 SPATA1Q5VX52 437 aa15.74■□□□□ 0.11
SQSTM1-205ENST00000464493 CD300LGQ6UXG3 332 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms