RNA–Protein interactions for RNA: ENST00000463526.1

CMSS1-202, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 3

Gene CMSS1, Length 397 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-202ENST00000463526 HOXA9P31269 272 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 ARPP19P56211 112 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 MLF2Q15773 248 aaPredicted RBP16.83■□□□□ 0.28
CMSS1-202ENST00000463526 UVSSAQ2YD98 709 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 KIAA2013Q8IYS2 634 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 KIFAP3Q92845 792 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
CMSS1-202ENST00000463526 FOXP1Q9H334 677 aaPredicted RBP16.83■□□□□ 0.28
CMSS1-202ENST00000463526 SEMA4AQ9H3S1 761 aa16.83■□□□□ 0.28
CMSS1-202ENST00000463526 DDX19AQ9NUU7 478 aaKnown RBP16.83■□□□□ 0.28
CMSS1-202ENST00000463526 MTF2Q9Y483 593 aaPredicted RBP16.83■□□□□ 0.28
CMSS1-202ENST00000463526 SMIM28A0A1B0GU29 152 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 KANSL1LA0AUZ9 987 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 TMEM189-UBE2V1I3L0A0 370 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 RBM25P49756 843 aaKnown RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 YARSP54577 528 aaKnown RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 PEX3P56589 373 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 SOX4Q06945 474 aaPredicted RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 UPP1Q16831 310 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 APBB1IPQ7Z5R6 666 aaPredicted RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 NPAS3Q8IXF0 933 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 CCDC94Q9BW85 323 aaPredicted RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 SPATA6Q9NWH7 488 aaPredicted RBP16.82■□□□□ 0.28
CMSS1-202ENST00000463526 LIMCH1Q9UPQ0 1083 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 TNFSF13BQ9Y275 285 aa16.82■□□□□ 0.28
CMSS1-202ENST00000463526 FAM170BA6NMN3 283 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 E9PMD0 336 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 SEC24BO95487 1268 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 RHOP08100 348 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 HARSP12081 509 aaKnown RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 MUTP22033 750 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ELF1P32519 619 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ORC2Q13416 577 aaPredicted RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ZNF568Q3ZCX4 644 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ZC3H14Q6PJT7 736 aaKnown RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ANKS3Q6ZW76 656 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 DCLK2Q8N568 766 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 C4orf32Q8N8J7 132 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 FAM184AQ8NB25 1140 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 UROC1Q96N76 676 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 ACO2Q99798 780 aaKnown RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 TCHPQ9BT92 498 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 TARS2Q9BW92 718 aaKnown RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 BCO2Q9BYV7 579 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 PLA2G2FQ9BZM2 168 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 CDT1Q9H211 546 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 KCNH3Q9ULD8 1083 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 NOL7Q9UMY1 257 aaKnown RBP16.81■□□□□ 0.28
CMSS1-202ENST00000463526 BACE2Q9Y5Z0 518 aa16.81■□□□□ 0.28
CMSS1-202ENST00000463526 CACNA1IQ9P0X4 2223 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 PODXLO00592 558 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 PRRG1O14668 218 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 HIP1RO75146 1068 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 LRG1P02750 347 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 GRM5P41594 1212 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 NPTX2P47972 431 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
CMSS1-202ENST00000463526 PFKPQ01813 784 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 PRKCQQ04759 706 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 SLC5A9Q2M3M2 681 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 MAML2Q8IZL2 1156 aaPredicted RBP16.8■□□□□ 0.28
CMSS1-202ENST00000463526 FBXO18Q8NFZ0 1043 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 COL4A3Q01955 1670 aa16.8■□□□□ 0.28
CMSS1-202ENST00000463526 VWA8A3KMH1 1905 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 SFI1A8K8P3 1242 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 PP2D1A8MPX8 630 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 LAMTOR5O43504 91 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 POU2F2P09086 479 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 CEBPBP17676 345 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 CDC25AP30304 524 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 ROR1Q01973 937 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 CSTF1Q05048 431 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 ZRSR1Q15695 479 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 VARS2Q5ST30 1063 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 POTEHQ6S545 545 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 TPRG1Q6ZUI0 275 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 ERMP1Q7Z2K6 904 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 RMDN1Q96DB5 314 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 ZMAT2Q96NC0 199 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 ACAP3Q96P50 834 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 CORO1BQ9BR76 489 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 DDX23Q9BUQ8 820 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 RUSC1Q9BVN2 902 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 MRPL4Q9BYD3 311 aaKnown RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 CYP4F11Q9HBI6 524 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 LTB4R2Q9NPC1 389 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 KMT5AQ9NQR1 393 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 TOPORSQ9NS56 1045 aaPredicted RBP16.79■□□□□ 0.28
CMSS1-202ENST00000463526 DNM3Q9UQ16 869 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
CMSS1-202ENST00000463526 PHLPP2Q6ZVD8 1323 aa16.78■□□□□ 0.28
CMSS1-202ENST00000463526 PTPN2P17706 415 aa16.78■□□□□ 0.28
CMSS1-202ENST00000463526 TRAPPC10P48553 1259 aa16.78■□□□□ 0.28
CMSS1-202ENST00000463526 PTGDRQ13258 359 aa16.78■□□□□ 0.28
CMSS1-202ENST00000463526 DMP1Q13316 513 aaPredicted RBP16.78■□□□□ 0.28
CMSS1-202ENST00000463526 TANGO2Q6ICL3 276 aa16.78■□□□□ 0.28
CMSS1-202ENST00000463526 ALKAL1Q6UXT8 129 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms