RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	CEP250	Q9BV73	2442 aa		12.31	□□□□□ -0.44
PTPN7-204	ENST00000462815	MED19	A0JLT2	244 aa	Predicted RBP	12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	ABLIM1	O14639	778 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	FCAR	P24071	287 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	TKT	P29401	623 aa	Known RBP	12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	MCM7	P33993	719 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	OR1D2	P34982	312 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	FOSB	P53539	338 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	PRKCQ	Q04759	706 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	UVSSA	Q2YD98	709 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	ZNF528	Q3MIS6	628 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	DCAF4L1	Q3SXM0	396 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	SLC44A4	Q53GD3	710 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	GLRA4	Q5JXX5	417 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	SLC8B1	Q6J4K2	584 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	PDXDC1	Q6P996	788 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	MTSS1L	Q765P7	747 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	RTL10	Q7L3V2	364 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	TAS1R3	Q7RTX0	852 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	CEP120	Q8N960	986 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	CCDC43	Q96MW1	224 aa	Known RBP	12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	OSBPL6	Q9BZF3	934 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	PLA2G2F	Q9BZM2	168 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	POLD4	Q9HCU8	107 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	DLL3	Q9NYJ7	618 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	GDA	Q9Y2T3	454 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	CDY1	Q9Y6F8	540 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	NCOR2	Q9Y618	2525 aa		12.3	□□□□□ -0.44
PTPN7-204	ENST00000462815	TRIP11	Q15643	1979 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	SMIM28	A0A1B0GU29	152 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	ARHGEF37	A1IGU5	675 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815		I3L4J1	428 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	XYLB	O75191	536 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	ABLIM3	O94929	683 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	OR52Z1	P0C646	297 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	MUT	P22033	750 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	BRCC3	P46736	316 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	ORC2	Q13416	577 aa	Predicted RBP	12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	PABPC1L	Q4VXU2	614 aa	Known RBP	12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	PRSS36	Q5K4E3	855 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	ATF7IP2	Q5U623	682 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	KIAA2013	Q8IYS2	634 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	DAW1	Q8N136	415 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	DCLK2	Q8N568	766 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	CLDN23	Q96B33	292 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	ZMAT2	Q96NC0	199 aa	Known RBP	12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	KXD1	Q9BQD3	176 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	LTB4R2	Q9NPC1	389 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	TNFSF13B	Q9Y275	285 aa		12.29	□□□□□ -0.44
PTPN7-204	ENST00000462815	WDR27	A2RRH5	827 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ARHGEF35	A5YM69	484 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	LILRB5	O75023	590 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ECI2	O75521	394 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	B3GAT3	O94766	335 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	RHO	P08100	348 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	TDGF1	P13385	188 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	CEBPB	P17676	345 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	CD72	P21854	359 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	PROZ	P22891	400 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	TARS	P26639	723 aa	Known RBP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	GRM5	P41594	1212 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	FXR2	P51116	673 aa	Known RBP eCLIP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	EFNA5	P52803	228 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ROR1	Q01973	937 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	MAPK7	Q13164	816 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	MRPL58	Q14197	206 aa	Known RBP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ZC3H14	Q6PJT7	736 aa	Known RBP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ZBTB44	Q8NCP5	570 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	DEPTOR	Q8TB45	409 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ING5	Q8WYH8	240 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	RUBCN	Q92622	972 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	SHD	Q96IW2	340 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	UROC1	Q96N76	676 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ADPGK	Q9BRR6	497 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	CDT1	Q9H211	546 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	PRMT8	Q9NR22	394 aa	Predicted RBP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	ARHGAP28	Q9P2N2	729 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	DAXX	Q9UER7	740 aa	Predicted RBP	12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	FBXO4	Q9UKT5	387 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	NCAN	O14594	1321 aa		12.28	□□□□□ -0.44
PTPN7-204	ENST00000462815	PDCD11	Q14690	1871 aa	Known RBP	12.27	□□□□□ -0.44
PTPN7-204	ENST00000462815	MOSPD3	O75425	235 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	CCR2	P41597	374 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	GUCY1B3	Q02153	619 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	NBR1	Q14596	966 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	PPP2R5A	Q15172	486 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZNF174	Q15697	407 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	TANGO2	Q6ICL3	276 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	ANKS3	Q6ZW76	656 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	IGSF22	Q8N9C0	903 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	ZNF461	Q8TAF7	563 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	ACO2	Q99798	780 aa	Known RBP	12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	HINFP	Q9BQA5	517 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	BHMT2	Q9H2M3	363 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	GDE1	Q9NZC3	331 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	POLI	Q9UNA4	740 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	PHLPP2	Q6ZVD8	1323 aa		12.27	□□□□□ -0.45
PTPN7-204	ENST00000462815	FAM170B	A6NMN3	283 aa		12.26	□□□□□ -0.45
PTPN7-204	ENST00000462815	SEC24A	O95486	1093 aa		12.26	□□□□□ -0.45

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms