RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 CITO14578 2027 aa17.28■□□□□ 0.36
ERCC3-206ENST00000462306 XIRP2A4UGR9 3374 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 EIF3DO15371 548 aaKnown RBP eCLIP17.27■□□□□ 0.36
ERCC3-206ENST00000462306 TBX10O75333 385 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 ZNF202O95125 648 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 IGFBP6P24592 240 aaPredicted RBP17.27■□□□□ 0.36
ERCC3-206ENST00000462306 CLCNKBP51801 687 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 BMS1Q14692 1282 aaKnown RBP17.27■□□□□ 0.36
ERCC3-206ENST00000462306 POSTNQ15063 836 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 UPP1Q16831 310 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 LEXMQ3ZCV2 418 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 CD300LGQ6UXG3 332 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 KRBA2Q6ZNG9 492 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 STXBP4Q6ZWJ1 553 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 ZNF507Q8TCN5 953 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 POMGNT1Q8WZA1 660 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 C18orf25Q96B23 403 aaPredicted RBP17.27■□□□□ 0.36
ERCC3-206ENST00000462306 UROC1Q96N76 676 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 TMEM206Q9H813 350 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 CHST7Q9NS84 486 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 CHMP5Q9NZZ3 219 aa17.27■□□□□ 0.36
ERCC3-206ENST00000462306 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 LACTBL1A8MY62 500 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 H3BQ06 376 aaPredicted RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 TMEM189-UBE2V1I3L0A0 370 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 TADA2AO75478 443 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 MYL1P05976 194 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 PRR29P0C7W0 189 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 ACOT2P49753 483 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 KCNQ1P51787 676 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 RBM10P98175 930 aaKnown RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 ZBTB6Q15916 424 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 AAK1Q2M2I8 961 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 KIAA0319Q5VV43 1072 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 DCLRE1AQ6PJP8 1040 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 CRELD2Q6UXH1 353 aaPredicted RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 EP400NLQ6ZTU2 488 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 SYCP3Q8IZU3 236 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 FMR1NBQ8N0W7 255 aaPredicted RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 HASPINQ8TF76 798 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 RPF1Q9H9Y2 349 aaKnown RBP17.26■□□□□ 0.35
ERCC3-206ENST00000462306 CLEC1BQ9P126 229 aa17.26■□□□□ 0.35
ERCC3-206ENST00000462306 FSD2A1L4K1 749 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 GOLGA6L4A6NEF3 574 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 CLASP2O75122 1294 aaKnown RBP17.25■□□□□ 0.35
ERCC3-206ENST00000462306 BMP1P13497 986 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 GARTP22102 1010 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 GLUD2P49448 558 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 POU5F1Q01860 360 aaKnown RBP17.25■□□□□ 0.35
ERCC3-206ENST00000462306 DSG1Q02413 1049 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 SPAG1Q07617 926 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 KMT5BQ4FZB7 885 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 TJAP1Q5JTD0 557 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 TMEM184AQ6ZMB5 413 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 C3orf58Q8NDZ4 430 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 ZSWIM2Q8NEG5 633 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 ENGASEQ8NFI3 743 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.25■□□□□ 0.35
ERCC3-206ENST00000462306 SCFD1Q8WVM8 642 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 DDX27Q96GQ7 796 aaKnown RBP17.25■□□□□ 0.35
ERCC3-206ENST00000462306 MSLNLQ96KJ4 702 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 B3GALT6Q96L58 329 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 TSPAN18Q96SJ8 248 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 CBWD1Q9BRT8 395 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 SLC39A2Q9NP94 309 aa17.25■□□□□ 0.35
ERCC3-206ENST00000462306 MRPL17Q9NRX2 175 aaKnown RBP17.25■□□□□ 0.35
ERCC3-206ENST00000462306 PDCD11Q14690 1871 aaKnown RBP17.24■□□□□ 0.35
ERCC3-206ENST00000462306 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
ERCC3-206ENST00000462306 TGFB1I1O43294 461 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 B3GAT3O94766 335 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 URODP06132 367 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 CNPP09543 421 aaKnown RBP17.24■□□□□ 0.35
ERCC3-206ENST00000462306 CA8P35219 290 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 NDUFV1P49821 464 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 DPYDQ12882 1025 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 SNW1Q13573 536 aaKnown RBP17.24■□□□□ 0.35
ERCC3-206ENST00000462306 BMT2Q1RMZ1 405 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 USP41Q3LFD5 358 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 CD302Q8IX05 232 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 GPR65Q8IYL9 337 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 TMEM130Q8N3G9 435 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 KIF12Q96FN5 646 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 KLHL5Q96PQ7 755 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 RXFP1Q9HBX9 757 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 TUBGCP4Q9UGJ1 667 aa17.24■□□□□ 0.35
ERCC3-206ENST00000462306 BARX2Q9UMQ3 279 aaPredicted RBP17.24■□□□□ 0.35
ERCC3-206ENST00000462306 UBE4BO95155 1302 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 PODXLO00592 558 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 C2CD2LO14523 706 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
ERCC3-206ENST00000462306 CYP3A5P20815 502 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 RPL9P32969 192 aaKnown RBP17.23■□□□□ 0.35
ERCC3-206ENST00000462306 STK4Q13043 487 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 PSMD2Q13200 908 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 RTP2Q5QGT7 225 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 FAM171A1Q5VUB5 890 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 JADE1Q6IE81 842 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
ERCC3-206ENST00000462306 SLC22A17Q8WUG5 538 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms