RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PRKD2Q9BZL6 878 aa9.69□□□□□ -0.86
LDB1-203ENST00000461873 CDT1Q9H211 546 aa9.69□□□□□ -0.86
LDB1-203ENST00000461873 PARVGQ9HBI0 331 aa9.69□□□□□ -0.86
LDB1-203ENST00000461873 WDR6Q9NNW5 1121 aaKnown RBP9.69□□□□□ -0.86
LDB1-203ENST00000461873 ARHGAP28Q9P2N2 729 aa9.69□□□□□ -0.86
LDB1-203ENST00000461873 MTCL1Q9Y4B5 1905 aaKnown RBP9.69□□□□□ -0.86
LDB1-203ENST00000461873 CITO14578 2027 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 ARHGEF37A1IGU5 675 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 TTLL13PA6NNM8 815 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 F8W810 466 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 PODXLO00592 558 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 PTGESO14684 152 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 TRAK2O60296 914 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 RFPL2O75678 378 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 ZMYND10O75800 440 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 ASGR2P07307 311 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 C8AP07357 584 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 HNRNPA1P09651 372 aaKnown RBP eCLIP9.68□□□□□ -0.86
LDB1-203ENST00000461873 FSHRP23945 695 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 OR1D2P34982 312 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 SLC12A3P55017 1021 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 ARPP19P56211 112 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 CEBPZQ03701 1054 aaKnown RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 IL17AQ16552 155 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 UVSSAQ2YD98 709 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 RTP2Q5QGT7 225 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 HYIQ5T013 277 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 RRAGBQ5VZM2 374 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 HAUS6Q7Z4H7 955 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 USP37Q86T82 979 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 RNF168Q8IYW5 571 aaPredicted RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 FLCNQ8NFG4 579 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 LARP4BQ92615 738 aaKnown RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 PAAF1Q9BRP4 392 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 ZSCAN16Q9H4T2 348 aaPredicted RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 RPF1Q9H9Y2 349 aaKnown RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 CACNG4Q9UBN1 327 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 CDH22Q9UJ99 828 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 EXOC7Q9UPT5 735 aa9.68□□□□□ -0.86
LDB1-203ENST00000461873 R3HCC1Q9Y3T6 440 aaKnown RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 ZFP37Q9Y6Q3 630 aaPredicted RBP9.68□□□□□ -0.86
LDB1-203ENST00000461873 TRIP11Q15643 1979 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 TMEM189-UBE2V1I3L0A0 370 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 CD2BP2O95400 341 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 BRD1O95696 1058 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 CLTAP09496 248 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 MAPTP10636 758 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 PDIA4P13667 645 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 DDIT3P35638 169 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 NUBP1P53384 320 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 KARSQ15046 597 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 UPP1Q16831 310 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 AXDND1Q5T1B0 1012 aaPredicted RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 SLFN12LQ6IEE8 588 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 IQCEQ6IPM2 695 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 DSTYKQ6XUX3 929 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 CCDC73Q6ZRK6 1079 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 SV2BQ7L1I2 683 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 RTL10Q7L3V2 364 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 KCNK18Q7Z418 384 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 HSCBQ8IWL3 235 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 TMEM161BQ8NDZ6 487 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 LNX1Q8TBB1 728 aaPredicted RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 SLC7A14Q8TBB6 771 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 RAD54LQ92698 747 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 KIF12Q96FN5 646 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 SNX27Q96L92 541 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 PNMA5Q96PV4 448 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 PPP1R10Q96QC0 940 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 MMTAG2Q9BU76 263 aaKnown RBP9.67□□□□□ -0.86
LDB1-203ENST00000461873 MSTO1Q9BUK6 570 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 RHOBTB2Q9BYZ6 727 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 LRRC27Q9C0I9 530 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 PLEKHA5Q9HAU0 1116 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 KCNK12Q9HB15 430 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 CDY1Q9Y6F8 540 aa9.67□□□□□ -0.86
LDB1-203ENST00000461873 PLXNA3P51805 1871 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 NPHP3-ACAD11A0A0J9YXS1 232 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 K7ELQ4 463 aaPredicted RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 SYN3O14994 580 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CCL16O15467 120 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CPB1P15086 417 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 KCNE1P15382 129 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 PLCG1P19174 1290 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 FGFR3P22607 806 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 TKTP29401 623 aaKnown RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 AVPR2P30518 371 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 STAT6P42226 847 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 MCM6Q14566 821 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 STK38Q15208 465 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CTXN3Q4LDR2 81 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 TMEM119Q4V9L6 283 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 ZNF280DQ6N043 979 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 STXBP4Q6ZWJ1 553 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 MTSS1LQ765P7 747 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 GRASPQ7Z6J2 395 aaPredicted RBP9.66□□□□□ -0.86
LDB1-203ENST00000461873 CD302Q8IX05 232 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 SYCP3Q8IZU3 236 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 DAW1Q8N136 415 aa9.66□□□□□ -0.86
LDB1-203ENST00000461873 CEP120Q8N960 986 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms