RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GNL3LQ9NVN8 582 aaKnown RBP3.89□□□□□ -1.79
VCL-203ENST00000461383 PCDHA6Q9UN73 950 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 NR2E1Q9Y466 385 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 PCDHA1Q9Y5I3 950 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 ACTL7AQ9Y615 435 aa3.89□□□□□ -1.79
VCL-203ENST00000461383 F5H423 210 aaPredicted RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 ARHGAP6O43182 974 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 CREB3O43889 395 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 AMY1AP04745 511 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 GNAI3P08754 354 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 RPL17P18621 184 aaKnown RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 CASRP41180 1078 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 ALDH5A1P51649 535 aaPredicted RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 NPEPPSP55786 919 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 CTXN1P60606 82 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 GNAI1P63096 354 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 APBA1Q02410 837 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 SP140Q13342 867 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 SNAPC2Q13487 334 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 DHX8Q14562 1220 aaKnown RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 ACAP1Q15027 740 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 GAGE13Q4V321 117 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 FAM26FQ5R3K3 315 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 PRAMEF14Q5SWL7 426 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 XRRA1Q6P2D8 792 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 DPP9Q86TI2 863 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 SKAP1Q86WV1 359 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 COL23A1Q86Y22 540 aaPredicted RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 ADGRG2Q8IZP9 1017 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 CMTM4Q8IZR5 234 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 KRT78Q8N1N4 520 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 CCDC33Q8N5R6 958 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 ADAMTS17Q8TE56 1095 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 APIPQ96GX9 242 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 C20orf173Q96LM9 149 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 RIPOR3Q96MK2 946 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 DMRTA2Q96SC8 542 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 SELENOOQ9BVL4 669 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 BTBD1Q9H0C5 482 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 C12orf65Q9H3J6 166 aaKnown RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 PPCSQ9HAB8 311 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 PNPLA8Q9NP80 782 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 PIH1D1Q9NWS0 290 aaKnown RBP3.88□□□□□ -1.79
VCL-203ENST00000461383 ADAM29Q9UKF5 820 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 LRCH1Q9Y2L9 728 aa3.88□□□□□ -1.79
VCL-203ENST00000461383 A0A1B0GTL3 188 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 SH3D21A4FU49 640 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 C9orf118A6NHY6 69 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 RASA4BC9J798 803 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 FOXN3O00409 490 aaPredicted RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 KIAA0391O15091 583 aaKnown RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 RASA4O43374 803 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 FRS3O43559 492 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 TCEA3O75764 348 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 CD1AP06126 327 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 MTHFD1P11586 935 aaKnown RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 ATP5JP18859 108 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 FPR1P21462 350 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PCSK1P29120 753 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 GUCY1A2P33402 732 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 BUD31P41223 144 aaPredicted RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 PIK3CBP42338 1070 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ALDH1A3P47895 512 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PRIM2P49643 509 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 GZMKP49863 264 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 AFF3P51826 1226 aaKnown RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 ADCY7P51828 1080 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 CTSWP56202 376 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 MTM1Q13496 603 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 CNGA2Q16280 664 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ZNF827Q17R98 1081 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 VWA3BQ502W6 1294 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ANO1Q5XXA6 986 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 AFMIDQ63HM1 303 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ZNF572Q7Z3I7 529 aaPredicted RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 AOPEPQ8N6M6 819 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PCSK9Q8NBP7 692 aaKnown RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 IL31RAQ8NI17 732 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PHKBQ93100 1093 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 SUCLG2Q96I99 432 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 KCNC2Q96PR1 638 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PACSIN1Q9BY11 444 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 C11orf54Q9H0W9 315 aaPredicted RBP3.87□□□□□ -1.79
VCL-203ENST00000461383 VPS11Q9H270 941 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 CERS4Q9HA82 394 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ATP6V0A4Q9HBG4 840 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PTPRHQ9HD43 1115 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 PARD6AQ9NPB6 346 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 HDAC5Q9UQL6 1122 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 CEP83Q9Y592 693 aa3.87□□□□□ -1.79
VCL-203ENST00000461383 ABHD14A-ACY1A0A1B0GW23 586 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 A0A1W2PRX2 142 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 POM121BA6NF01 834 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 MROH6A6NGR9 719 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 ISM1B1AKI9 464 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 F2RL2O00254 374 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 GRM6O15303 877 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 B4GALT4O60513 344 aa3.86□□□□□ -1.79
VCL-203ENST00000461383 AHSGP02765 367 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms