RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PCDHA13Q9Y5I0 950 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NUP188Q5SRE5 1749 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC15A5A6NIM6 579 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ASMTLO95671 621 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 JAK1P23458 1154 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CTNNB1P35222 781 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AVPR1AP37288 418 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DHX9Q08211 1270 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 THOC5Q13769 683 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF484Q5JVG2 852 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FANCBQ8NB91 859 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RSAD2Q8WXG1 361 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LZICQ8WZA0 190 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SPDL1Q96EA4 605 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ABHD10Q9NUJ1 306 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RWDD2AQ9UIY3 292 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF711Q9Y462 761 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KLRF2D3W0D1 207 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PDE2AO00408 941 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ODC1P11926 461 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PHKA1P46020 1223 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CASP7P55210 303 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NCAPHQ15003 741 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF667Q5HYK9 610 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 KIRREL3Q8IZU9 778 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CENPSQ8N2Z9 138 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 WHAMMQ8TF30 809 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PAGE5Q96GU1 130 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF558Q96NG5 402 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ABCG4Q9H172 646 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SENP2Q9HC62 589 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 XPNPEP3Q9NQH7 507 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DAAM1Q9Y4D1 1078 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GOLGA8TH3BQL2 631 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TEX33O43247 280 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TLL1O43897 1013 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HBP1O60381 514 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GDF11O95390 407 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 APOA4P06727 396 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GOLGA8HP0CJ92 632 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 H2AFXP16104 143 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RPIAP49247 311 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PFKPQ01813 784 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DEUP1Q05D60 604 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ADCY1Q08828 1119 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SYTL3Q4VX76 610 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LRRC23Q53EV4 343 aaPredicted RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DCAF6Q58WW2 860 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TCP11X2Q5H9J9 407 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TAF2Q6P1X5 1199 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 COG1Q8WTW3 980 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FAM149B1Q96BN6 582 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CCDC124Q96CT7 223 aaKnown RBP6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PPP1R16AQ96I34 528 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DCLK3Q9C098 648 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 C11orf49Q9H6J7 331 aa6.62□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF839A8K0R7 811 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 BMP10O95393 424 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CHEK2O96017 543 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TROVE2P10155 538 aaKnown RBP eCLIP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EEF1GP26641 437 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SOX5P35711 763 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 EIF4A3P38919 411 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ABL2P42684 1182 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 VASPP50552 380 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PDE1CQ14123 709 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NBPF12Q5TAG4 269 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF658Q5TYW1 1059 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZNF280DQ6N043 979 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 C7orf61Q8IZ16 206 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 RDM1Q8NG50 284 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GMCL1Q96IK5 515 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 AK8Q96MA6 479 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 CNOT10Q9H9A5 744 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPRC5DQ9NZD1 345 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SHANK3Q9BYB0 1731 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ANO9A1A5B4 782 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 K7ERI5 159 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLCO1A2P46721 670 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 HARS2P49590 506 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 SLC26A2P50443 739 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GPBP1Q86WP2 473 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 L3MBTL3Q96JM7 780 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ELAC2Q9BQ52 826 aaKnown RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FOXP1Q9H334 677 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ERAP1Q9NZ08 941 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TTLL13PA6NNM8 815 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 ZBTB48P10074 688 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 PYGMP11217 842 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 LAG3P18627 525 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 FGFR2P21802 821 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 TECP42680 631 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GUCA1AP43080 201 aaPredicted RBP6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 GUCY1A3Q02108 690 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 USP4Q13107 963 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 NR5A1Q13285 461 aa6.61□□□□□ -1.35
HLA-DQA1-205ENST00000460633 DIXDC1Q155Q3 683 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms