RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 XKR4Q5GH76 650 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 GLRA4Q5JXX5 417 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 FUT10Q6P4F1 479 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 ALKAL1Q6UXT8 129 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 TRIM67Q6ZTA4 783 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 STAMQ92783 540 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 CASP10Q92851 521 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 SNX27Q96L92 541 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 PPP1R10Q96QC0 940 aaKnown RBP16.3■□□□□ 0.2
ATG4B-213ENST00000460211 ACCSQ96QU6 501 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 MSTO1Q9BUK6 570 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 TRIM9Q9C026 710 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 TBC1D7Q9P0N9 293 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 USP25Q9UHP3 1055 aa16.3■□□□□ 0.2
ATG4B-213ENST00000460211 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 SF3B1O75533 1304 aaKnown RBP eCLIP16.29■□□□□ 0.27e-7■■■■□ 20.8
ATG4B-213ENST00000460211 A0A0B4J269 797 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 OGTO15294 1046 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 CLASP2O75122 1294 aaKnown RBP16.29■□□□□ 0.2
ATG4B-213ENST00000460211 GLP2RO95838 553 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 KCNE1P15382 129 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 KLRC2P26717 231 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 GLUD2P49448 558 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 RBM10P98175 930 aaKnown RBP16.29■□□□□ 0.2
ATG4B-213ENST00000460211 PTPN14Q15678 1187 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 USP41Q3LFD5 358 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 DCLRE1AQ6PJP8 1040 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 TMEM184AQ6ZMB5 413 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 SYCP3Q8IZU3 236 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 SMRP1Q8NCR6 262 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 TSPAN18Q96SJ8 248 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 C7orf25Q9BPX7 421 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 VN1R3Q9BXE9 311 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 TMEM206Q9H813 350 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 RPF1Q9H9Y2 349 aaKnown RBP16.29■□□□□ 0.2
ATG4B-213ENST00000460211 CNTN3Q9P232 1028 aa16.29■□□□□ 0.2
ATG4B-213ENST00000460211 USP15Q9Y4E8 981 aaPredicted RBP16.29■□□□□ 0.2
ATG4B-213ENST00000460211 C2CD2LO14523 706 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 XPOTO43592 962 aaKnown RBP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 TRAPPC3O43617 180 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 B3GAT3O94766 335 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 SLFN14P0C7P3 912 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 HOXB8P17481 243 aaPredicted RBP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 RPL9P32969 192 aaKnown RBP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 ZXDAP98168 799 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 CREMQ03060 361 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 COASYQ13057 564 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 SLC10A6Q3KNW5 377 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 L1TD1Q5T7N2 865 aaKnown RBP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 LLGL2Q6P1M3 1020 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 CNNM4Q6P4Q7 775 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 SUGP1Q8IWZ8 645 aaKnown RBP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 CD302Q8IX05 232 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 GPR65Q8IYL9 337 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 AUTS2Q8WXX7 1259 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 POMGNT1Q8WZA1 660 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 RABGGTAQ92696 567 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 RPGRIP1Q96KN7 1286 aa16.28■□□□□ 0.2
ATG4B-213ENST00000460211 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG4B-213ENST00000460211 LOC730098B7Z3J9 87 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 PPP1R37O75864 691 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 KIF4AO95239 1232 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 ADH1AP07327 375 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 CXCL8P10145 99 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 NAB2Q15742 525 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 TPRNQ4KMQ1 711 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 SEZ6Q53EL9 994 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 ELMSAN1Q6PJG2 1045 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 TAS1R1Q7RTX1 841 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 BMP8AQ7Z5Y6 402 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 RNF168Q8IYW5 571 aaPredicted RBP16.27■□□□□ 0.2
ATG4B-213ENST00000460211 HASPINQ8TF76 798 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 KLHL5Q96PQ7 755 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 PAAF1Q9BRP4 392 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 STRA6Q9BX79 667 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 GPR62Q9BZJ7 368 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 CXCL16Q9H2A7 254 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 CHST7Q9NS84 486 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 CACNG4Q9UBN1 327 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 DPP7Q9UHL4 492 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 AGO2Q9UKV8 859 aaKnown RBP16.27■□□□□ 0.2
ATG4B-213ENST00000460211 HCFC2Q9Y5Z7 792 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 STYXL1Q9Y6J8 313 aa16.27■□□□□ 0.2
ATG4B-213ENST00000460211 KMT2EQ8IZD2 1858 aa16.27■□□□□ 0.19
ATG4B-213ENST00000460211 TDRD15B5MCY1 1934 aaKnown RBP16.26■□□□□ 0.19
ATG4B-213ENST00000460211 A0A1B0GVL5 298 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 PVALEFA0A1B0GWK0 134 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 A0A1W2PQ27 194 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 A0A1W2PQ64 194 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 A0A1W2PQD8 194 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 GOLGA6L4A6NEF3 574 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 SPDYE4A6NLX3 237 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 ANKRD63C9JTQ0 380 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 F8W810 466 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 TMEM189-UBE2V1I3L0A0 370 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 LILRB3O75022 631 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 EFEMP2O95967 443 aa16.26■□□□□ 0.19
ATG4B-213ENST00000460211 CNPP09543 421 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms