RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 PRG3Q9Y2Y8 225 aaPredicted RBP11.8□□□□□ -0.52
CCDC12-204ENST00000460035 TSC2P49815 1807 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 NRP1O14786 923 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 GRM6O15303 877 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 NR3C1P04150 777 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 ITGB1P05556 798 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 RPL13P26373 211 aaKnown RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 PPM1AP35813 382 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 PPP1R2P41236 205 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 ADAM9Q13443 819 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 HSP90AA2PQ14568 343 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 NAB2Q15742 525 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 NFIL3Q16649 462 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 CEP135Q66GS9 1140 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 JADE1Q6IE81 842 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 CBWD2Q8IUF1 395 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 SLC9A9Q8IVB4 645 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 ADSSL1Q8N142 457 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 MICAL1Q8TDZ2 1067 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 MYLIPQ8WY64 445 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 TMEM169Q96HH4 297 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 FBXL18Q96ME1 805 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 PPP1R10Q96QC0 940 aaKnown RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 CDX2Q99626 313 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 TSG101Q99816 390 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 MTMR10Q9NXD2 777 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 RBAKQ9NYW8 714 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 CACNG4Q9UBN1 327 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 TRAF3IP3Q9Y228 551 aa11.79□□□□□ -0.52
CCDC12-204ENST00000460035 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.79□□□□□ -0.52
CCDC12-204ENST00000460035 PSMA7O14818 248 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 XPOTO43592 962 aaKnown RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 TADA2AO75478 443 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 IL18RAPO95256 599 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 PTMSP20962 102 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 BMP6P22004 513 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 MYBPC2Q14324 1141 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 TMEM132DQ14C87 1099 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 SNRNP35Q16560 246 aaKnown RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 ZCWPW2Q504Y3 356 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 RBM43Q6ZSC3 357 aaKnown RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 BRSK2Q8IWQ3 736 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 SLC39A11Q8N1S5 342 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 SPPL3Q8TCT6 385 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 CACTINQ8WUQ7 758 aaKnown RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 C18orf25Q96B23 403 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 DHTKD1Q96HY7 919 aaPredicted RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 IGSF21Q96ID5 467 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 PAAF1Q9BRP4 392 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 ASB7Q9H672 318 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 GOLGA2P5Q9HBQ8 144 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 PDE11AQ9HCR9 933 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 DMAC2Q9NW81 257 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 UBQLN1Q9UMX0 589 aaKnown RBP11.78□□□□□ -0.52
CCDC12-204ENST00000460035 FRMD4BQ9Y2L6 1034 aa11.78□□□□□ -0.52
CCDC12-204ENST00000460035 SZT2Q5T011 3432 aa11.77□□□□□ -0.52
CCDC12-204ENST00000460035 PLXNA3P51805 1871 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 PPP1R3GB7ZBB8 358 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 NFICP08651 508 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CD44P16070 742 aaKnown RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 NR2F2P24468 414 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 RPL9P32969 192 aaKnown RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CA8P35219 290 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CLCNKBP51801 687 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 GUCY2FP51841 1108 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 STX17P56962 302 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 PLCB3Q01970 1234 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 SOX4Q06945 474 aaPredicted RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 ADGRE1Q14246 886 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 SURF1Q15526 300 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 ZBTB6Q15916 424 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 PTPROQ16827 1216 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 EDRF1Q3B7T1 1238 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CCDC183Q5T5S1 534 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 ANKRD40Q6AI12 368 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CENPPQ6IPU0 288 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 DCLRE1AQ6PJP8 1040 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 FOXR2Q6PJQ5 311 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 TMEM173Q86WV6 379 aaPredicted RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 BEST2Q8NFU1 509 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 HASPINQ8TF76 798 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 POF1BQ8WVV4 589 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 NELFBQ8WX92 580 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 CCDC127Q96BQ5 260 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 DDX27Q96GQ7 796 aaKnown RBP11.77□□□□□ -0.53
CCDC12-204ENST00000460035 UROC1Q96N76 676 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 GUCD1Q96NT3 240 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 FNBP1Q96RU3 617 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 TUBGCP4Q9UGJ1 667 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 DERAQ9Y315 318 aa11.77□□□□□ -0.53
CCDC12-204ENST00000460035 TRIM49BA6NDI0 452 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 F8W810 466 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 PODXLO00592 558 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 CETN3O15182 167 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 LPXNO60711 386 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 B3GAT3O94766 335 aa11.76□□□□□ -0.53
CCDC12-204ENST00000460035 DLATP10515 647 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms