RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 SIM2Q14190 667 aaPredicted RBP12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 GRM2Q14416 872 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 BECN1Q14457 450 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CSRP2Q16527 193 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 TANGO2Q6ICL3 276 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CCDC83Q8IWF9 413 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 DNASE1L2Q92874 299 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 SLC26A6Q9BXS9 759 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 XPNPEP1Q9NQW7 623 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PARP2Q9UGN5 583 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 VAV3Q9UKW4 847 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 KIF3AQ9Y496 699 aa12.49□□□□□ -0.41
PRAMEF35P-201ENST00000458709 NRG2O14511 850 aaPredicted RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ZBTB39O15060 712 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ASAP2O43150 1006 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 RHOP08100 348 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 FCARP24071 287 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 YWHABP31946 246 aaKnown RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 DDIT3P35638 169 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 NLRP5P59047 1200 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 AKAP17AQ02040 695 aaKnown RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 SSRP1Q08945 709 aaKnown RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 STK3Q13188 491 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PPP2R5CQ13362 524 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 TUSC3Q13454 348 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 NPY5RQ15761 445 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 N4BP2L1Q5TBK1 243 aaPredicted RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 HACE1Q8IYU2 909 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 TCP11Q8WWU5 503 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MTRQ99707 1265 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 LXNQ9BS40 222 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 GDE1Q9NZC3 331 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 DDX25Q9UHL0 483 aaKnown RBP12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PPME1Q9Y570 386 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 COL4A2P08572 1712 aa12.48□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ZMYM2Q9UBW7 1377 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CHURC1-FNTBB4DL54 471 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 M0R2N6 131 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 HRO43593 1189 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 JAK2O60674 1132 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 P4HBP07237 508 aaKnown RBP12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 HOXB3P14651 431 aaPredicted RBP12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 OR1D2P34982 312 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 FNTBP49356 437 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CCR3P51677 355 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CAPSQ13938 189 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 RAB33AQ14088 237 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 GAS6Q14393 721 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PPP2R5DQ14738 602 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MAMSTRQ6ZN01 415 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 EXOC8Q8IYI6 725 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 FBXO18Q8NFZ0 1043 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ASAP3Q8TDY4 903 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ELSPBP1Q96BH3 223 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CXCL16Q9H2A7 254 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 BRD9Q9H8M2 597 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 LMAN1LQ9HAT1 526 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 RGL1Q9NZL6 768 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 ORC3Q9UBD5 711 aaPredicted RBP12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 RBM19Q9Y4C8 960 aaKnown RBP12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 FRYQ5TBA9 3013 aa12.47□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MAN2B1O00754 1011 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PTGESO14684 152 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 DKC1O60832 514 aaKnown RBP eCLIP12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PDCP20941 246 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 SHC2P98077 582 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 TFDP1Q14186 410 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MXD4Q14582 209 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 UVSSAQ2YD98 709 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 IL31Q6EBC2 164 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 SLC27A1Q6PCB7 646 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MOXD1Q6UVY6 613 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 C4orf19Q8IY42 314 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 DDX1Q92499 740 aaKnown RBP12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 FAM3CQ92520 227 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 IER2Q9BTL4 223 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 MTRRQ9UBK8 725 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PCDHA4Q9UN74 947 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 CDY1Q9Y6F8 540 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 PIAS3Q9Y6X2 628 aa12.46□□□□□ -0.41
PRAMEF35P-201ENST00000458709 VWA8A3KMH1 1905 aa12.46□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ARID2Q68CP9 1835 aa12.46□□□□□ -0.42
PRAMEF35P-201ENST00000458709 A0A1B0GUA9 196 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CHRNB1P11230 501 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 IGFBP6P24592 240 aaPredicted RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 HOXC13P31276 330 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CXCL12P48061 93 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CYP4A11Q02928 519 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 CTTNQ14247 550 aaKnown RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 NAB2Q15742 525 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 INF2Q27J81 1249 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 FAM78AQ5JUQ0 283 aa12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 HEATR6Q6AI08 1181 aaKnown RBP12.45□□□□□ -0.42
PRAMEF35P-201ENST00000458709 PDXDC1Q6P996 788 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms