RNA–Protein interactions for RNA: ENST00000458022.6

SHF-202, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHF, Length 1,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-202ENST00000458022 CHAMP1Q96JM3 812 aa18■□□□□ 0.47
SHF-202ENST00000458022 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
SHF-202ENST00000458022 POLR3FQ9H1D9 316 aaPredicted RBP18■□□□□ 0.47
SHF-202ENST00000458022 CXCL16Q9H2A7 254 aa18■□□□□ 0.47
SHF-202ENST00000458022 FZD8Q9H461 694 aa18■□□□□ 0.47
SHF-202ENST00000458022 BRD9Q9H8M2 597 aa18■□□□□ 0.47
SHF-202ENST00000458022 TRPV5Q9NQA5 729 aa18■□□□□ 0.47
SHF-202ENST00000458022 SEMA4GQ9NTN9 838 aa18■□□□□ 0.47
SHF-202ENST00000458022 SNTG2Q9NY99 539 aa18■□□□□ 0.47
SHF-202ENST00000458022 ARHGEF37A1IGU5 675 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 RECQL4O94761 1208 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 PTPN2P17706 415 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 RBM25P49756 843 aaKnown RBP17.99■□□□□ 0.47
SHF-202ENST00000458022 RARRES1P49788 294 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 TOB2Q14106 344 aaPredicted RBP17.99■□□□□ 0.47
SHF-202ENST00000458022 GRM2Q14416 872 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 CSRP2Q16527 193 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 PRSS36Q5K4E3 855 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 CDCA2Q69YH5 1023 aaPredicted RBP17.99■□□□□ 0.47
SHF-202ENST00000458022 PRR23CQ6ZRP0 262 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 PRR23BQ6ZRT6 265 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 TRMT61BQ9BVS5 477 aaKnown RBP17.99■□□□□ 0.47
SHF-202ENST00000458022 PDZD7Q9H5P4 517 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 LMAN1LQ9HAT1 526 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 ZFP14Q9HCL3 533 aa17.99■□□□□ 0.47
SHF-202ENST00000458022 LRRIQ4A6NIV6 560 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 N4BP3O15049 544 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 MICAL2O94851 1124 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 BAG4O95429 457 aaKnown RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 IGFBP6P24592 240 aaPredicted RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 FAM78AQ5JUQ0 283 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 PIK3AP1Q6ZUJ8 805 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 ANKS3Q6ZW76 656 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 MAP4K3Q8IVH8 894 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 FAM3CQ92520 227 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 IRF7Q92985 503 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 DDX27Q96GQ7 796 aaKnown RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 YTHDC1Q96MU7 727 aaKnown RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 CCDC43Q96MW1 224 aaKnown RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 ZNF334Q9HCZ1 680 aaPredicted RBP17.98■□□□□ 0.47
SHF-202ENST00000458022 NOTCH4Q99466 2003 aa17.98■□□□□ 0.47
SHF-202ENST00000458022 CHD6Q8TD26 2715 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 TTLL13PA6NNM8 815 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 FOXD2O60548 495 aaPredicted RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 B3GAT3O94766 335 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 LRG1P02750 347 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 TKTP29401 623 aaKnown RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 CXCL12P48061 93 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 IRX6P78412 446 aaPredicted RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 ROR1Q01973 937 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 SIM2Q14190 667 aaPredicted RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 SLC8B1Q6J4K2 584 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 CPLX2Q6PUV4 134 aaKnown RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 CD300LGQ6UXG3 332 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 ZNF461Q8TAF7 563 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 DDX1Q92499 740 aaKnown RBP17.97■□□□□ 0.47
SHF-202ENST00000458022 ASB16Q96NS5 453 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 GPRC5CQ9NQ84 441 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
SHF-202ENST00000458022 CFAP47Q6ZTR5 3102 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 NRG2O14511 850 aaPredicted RBP17.96■□□□□ 0.47
SHF-202ENST00000458022 TRAPPC3O43617 180 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 ABLIM3O94929 683 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 CHRNB1P11230 501 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 CNR2P34972 360 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 SATB1Q01826 763 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 GAS6Q14393 721 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 RUFY3Q7L099 469 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 ZBTB8OSQ8IWT0 167 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 OXER1Q8TDS5 423 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 TCEAL4Q96EI5 215 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 PPP1R10Q96QC0 940 aaKnown RBP17.96■□□□□ 0.47
SHF-202ENST00000458022 CORO1BQ9BR76 489 aa17.96■□□□□ 0.47
SHF-202ENST00000458022 ARID2Q68CP9 1835 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 WDR27A2RRH5 827 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 ZNF197O14709 1029 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 HRO43593 1189 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 GDF9O60383 454 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 USO1O60763 962 aaKnown RBP17.95■□□□□ 0.46
SHF-202ENST00000458022 PAPSS2O95340 614 aaPredicted RBP17.95■□□□□ 0.46
SHF-202ENST00000458022 XRCC6P12956 609 aaKnown RBP eCLIP17.95■□□□□ 0.46
SHF-202ENST00000458022 PSMC3P17980 439 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 GDI1P31150 447 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 CLCNKBP51801 687 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 MLLT6P55198 1093 aaPredicted RBP17.95■□□□□ 0.46
SHF-202ENST00000458022 PRPF4BQ13523 1007 aaKnown RBP17.95■□□□□ 0.46
SHF-202ENST00000458022 UPP1Q16831 310 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 EARS2Q5JPH6 523 aaKnown RBP17.95■□□□□ 0.46
SHF-202ENST00000458022 VITQ6UXI7 678 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 SKAP1Q86WV1 359 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 TCEAL8Q8IYN2 117 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 SPEM1Q8N4L4 309 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 PIGOQ8TEQ8 1089 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 DEPDC1BQ8WUY9 529 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 SMARCD2Q92925 531 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 UROC1Q96N76 676 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 ADPGKQ9BRR6 497 aa17.95■□□□□ 0.46
SHF-202ENST00000458022 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms