RNA–Protein interactions for RNA: ENST00000457183.6

THBS3-203, Transcript of thrombospondin 3, humanhuman

TSL 2 BASIC

Gene THBS3, Length 2,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-203ENST00000457183 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.47□□□□□ -0.73
THBS3-203ENST00000457183 MTRF1LQ9UGC7 380 aaKnown RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 FBXO40Q9UH90 709 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 DNAJC12Q9UKB3 198 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 USP15Q9Y4E8 981 aaPredicted RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 PCDHA3Q9Y5H8 950 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 ALG6Q9Y672 507 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 FRMPD4Q14CM0 1322 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 IGF2BP3O00425 579 aaKnown RBP eCLIP10.47□□□□□ -0.73
THBS3-203ENST00000457183 PODXLO00592 558 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 SPATA31C1P0DKV0 1188 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 TM4SF4P48230 202 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 CLUL1Q15846 466 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 BMT2Q1RMZ1 405 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 GALNTL6Q49A17 601 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 BZW1Q7L1Q6 419 aaKnown RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 MGARPQ8TDB4 240 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 DYDC1Q8WWB3 177 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 PRCCQ92733 491 aaPredicted RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 KRT35Q92764 455 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 MS4A4AQ96JQ5 239 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 P2RX7Q99572 595 aaKnown RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 RNF146Q9NTX7 359 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 FGFR1OP2Q9NVK5 253 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 NOP53Q9NZM5 478 aaKnown RBP10.47□□□□□ -0.73
THBS3-203ENST00000457183 PCYOX1Q9UHG3 505 aa10.47□□□□□ -0.73
THBS3-203ENST00000457183 SYNGAP1Q96PV0 1343 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 ANKRD62A6NC57 917 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 A8MUI8 341 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 TCP11X1B4DZS4 312 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 NFIBO00712 420 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 SLC26A4O43511 780 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 RARGP13631 454 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 PEX19P40855 299 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 MARCKSL1P49006 195 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 INHBEP58166 350 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 CCDC137Q6PK04 289 aaKnown RBP10.46□□□□□ -0.73
THBS3-203ENST00000457183 OTUD6AQ7L8S5 288 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 ANKRD23Q86SG2 305 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 RIOX2Q8IUF8 465 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 SLFN12Q8IYM2 578 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 KIF2BQ8N4N8 673 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 ZNF570Q96NI8 536 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 ACAD9Q9H845 621 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 KIF9Q9HAQ2 790 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 BATF3Q9NR55 127 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 PARP2Q9UGN5 583 aa10.46□□□□□ -0.73
THBS3-203ENST00000457183 SFI1A8K8P3 1242 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 DIAPH2O60879 1101 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 SLC25A27O95847 323 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 KRT16P08779 473 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 TAL1P17542 331 aaPredicted RBP10.46□□□□□ -0.74
THBS3-203ENST00000457183 TNFAIP3P21580 790 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 CTNNA2P26232 953 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 RPA1P27694 616 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 GBP1P32455 592 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 ZNF131P52739 623 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 BNIP1Q12981 228 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 SLMAPQ14BN4 828 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 MFSD5Q6N075 450 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 RNF207Q6ZRF8 634 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 FAM186BQ8IYM0 893 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 KLHL29Q96CT2 875 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 HOMER3Q9NSC5 361 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 PTPN22Q9Y2R2 807 aa10.46□□□□□ -0.74
THBS3-203ENST00000457183 CCL15-CCL14A0A0B4J2E2 113 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 ANKRD63C9JTQ0 380 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 SUN1O94901 812 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CREB1P16220 341 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CCND1P24385 295 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 PSMC2P35998 433 aaKnown RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 FMO5P49326 533 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 COPS2P61201 443 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CCL15Q16663 113 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 LONRF1Q17RB8 773 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CBWD6Q4V339 395 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 PRR16Q569H4 304 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CBWD3Q5JTY5 395 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CBWD5Q5RIA9 395 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 NUGGCQ68CJ6 796 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 XRRA1Q6P2D8 792 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 NIPA1Q7RTP0 329 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 CCDC25Q86WR0 208 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 GBP7Q8N8V2 638 aaPredicted RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 ETNPPLQ8TBG4 499 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 SYTL5Q8TDW5 730 aaPredicted RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 FAM20AQ96MK3 541 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 RUSC1Q9BVN2 902 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 BHMT2Q9H2M3 363 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 RIPK3Q9Y572 518 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 TMEM120BA0PK00 339 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 TESPA1A2RU30 521 aaPredicted RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 EME2A4GXA9 379 aaPredicted RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 RPS6P62753 249 aaKnown RBP10.45□□□□□ -0.74
THBS3-203ENST00000457183 CYP4A11Q02928 519 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 GRIK3Q13003 919 aa10.45□□□□□ -0.74
THBS3-203ENST00000457183 FITM2Q8N6M3 262 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms