RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 MEA1Q16626 185 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 GSTA3Q16772 222 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 COBLL1Q53SF7 1204 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SLC30A10Q6XR72 485 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CATSPERGQ6ZRH7 1159 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SPATA31D4Q6ZUB0 917 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 C3orf62Q6ZUJ4 267 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 GPBP1Q86WP2 473 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KIAA0895Q8NCT3 520 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NEK9Q8TD19 979 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SYTL5Q8TDW5 730 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CTNNBL1Q8WYA6 563 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 DNAJC19Q96DA6 116 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SNX27Q96L92 541 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 TRIM47Q96LD4 638 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NAP1L3Q99457 506 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 EIF2AK1Q9BQI3 630 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 ZNF577Q9BSK1 485 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 LACRTQ9GZZ8 138 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 THAP9Q9H5L6 903 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 EPB41L5Q9HCM4 733 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RBM12Q9NTZ6 932 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 LARSQ9P2J5 1176 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 HESX1Q9UBX0 185 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 ADAMTS5Q9UNA0 930 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 DNM3Q9UQ16 869 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CHMP2BQ9UQN3 213 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 R3HDM2Q9Y2K5 976 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 LOXHD1Q8IVV2 1947 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 BICDL2A1A5D9 508 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 TMEM110-MUSTN1A8MSY1 372 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KCNJ18B7U540 433 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 BHMG1C9JSJ3 638 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 EIF3FO00303 357 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 O00370 1275 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 EML1O00423 815 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NVLO15381 856 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 GAS7O60861 476 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 VDRP11473 427 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CCNE1P24864 410 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 PAFAH1B1P43034 410 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NEK2P51955 445 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 PSMC6P62333 389 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CYP4A11Q02928 519 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 PPP2R5CQ13362 524 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 MTMR3Q13615 1198 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KCNJ12Q14500 433 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KRT31Q15323 416 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 TCP11X2Q5H9J9 407 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 WASHC2DQ5SRD0 308 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SNRNP48Q6IEG0 339 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 TTI2Q6NXR4 508 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NSMFQ6X4W1 530 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RNF207Q6ZRF8 634 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NANOGNBQ7Z5D8 188 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CCNJLQ8IV13 435 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 LRRC34Q8IZ02 419 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KIF2BQ8N4N8 673 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 REPS2Q8NFH8 660 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 IL31RAQ8NI17 732 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RBM46Q8TBY0 533 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 PIGOQ8TEQ8 1089 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 P2RX5Q93086 422 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 TAAR1Q96RJ0 339 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 BHMT2Q9H2M3 363 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RNF146Q9NTX7 359 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 KIAA1522Q9P206 1035 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 LNPEPQ9UIQ6 1025 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 NOVA2Q9UNW9 492 aaKnown RBP8.14□□□□□ -1.11
HDAC9-218ENST00000456174 STK38LQ9Y2H1 464 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 RIPK3Q9Y572 518 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 CSADQ9Y600 493 aa8.14□□□□□ -1.11
HDAC9-218ENST00000456174 SCN4AP35499 1836 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 RCCD1A6NED2 376 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CHMP2AO43633 222 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SNX3O60493 162 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TACC1O75410 805 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 KRT18P05783 430 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SKIP12755 728 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ITGB5P18084 799 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 HOXA7P31268 230 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CYLC1P35663 651 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 PTDSS1P48651 473 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SERPINB8P50452 374 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 OAZ1P54368 228 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SLC12A3P55017 1021 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MTTPP55157 894 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 GEMIN4P57678 1058 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MAGOHP61326 146 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 EHHADHQ08426 723 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 COASYQ13057 564 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 MAP7Q14244 749 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 KPNB1Q14974 876 aaKnown RBP8.13□□□□□ -1.11
HDAC9-218ENST00000456174 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 ODF2Q5BJF6 829 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 SH3D19Q5HYK7 790 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 CFAP157Q5JU67 520 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 RASIP1Q5U651 963 aa8.13□□□□□ -1.11
HDAC9-218ENST00000456174 PCNX4Q63HM2 1172 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms