RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 RGL1Q9NZL6 768 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 SUCLA2Q9P2R7 463 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 WRAP73Q9P2S5 460 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 VTI1BQ9UEU0 232 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 DDX25Q9UHL0 483 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TPCN1Q9ULQ1 816 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 USP15Q9Y4E8 981 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 TDRD15B5MCY1 1934 aaKnown RBP5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 NID2Q14112 1375 aa5.26□□□□□ -1.57
GTF3C3-208ENST00000455546 BDP1A6H8Y1 2624 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 IGKV6-21A0A0C4DH24 114 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 A0A0U1RQF3 1178 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 CCNT1O60563 726 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 GADD45BO75293 160 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 MAFO75444 373 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 CTDNEP1O95476 244 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 CXCL14O95715 111 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 EOMESO95936 686 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 NEFLP07196 543 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 LAG3P18627 525 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 DNM2P50570 870 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 AFF1P51825 1210 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 BCAR1P56945 870 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 PSMC5P62195 406 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 KRT17Q04695 432 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 UBE3AQ05086 875 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 KCNC3Q14003 757 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 CTTNQ14247 550 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 NONOQ15233 471 aaKnown RBP eCLIP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 DUSP6Q16828 381 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 XKR3Q5GH77 459 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 TWF2Q6IBS0 349 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 ANKRD54Q6NXT1 300 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 SYCE2Q6PIF2 218 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 B3GNT9Q6UX72 402 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 ANO5Q75V66 913 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM173Q86WV6 379 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 TPH2Q8IWU9 490 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 GPR161Q8N6U8 529 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 C12orf76Q8N812 135 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 NECAB1Q8N987 351 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 HAS1Q92839 578 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM143Q96AN5 459 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 FBXL18Q96ME1 805 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 NLRP4Q96MN2 994 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 MBOAT7Q96N66 472 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF558Q96NG5 402 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 PHF20Q9BVI0 1012 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 GCOM2Q9BZD3 368 aaPredicted RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 GBP3Q9H0R5 595 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 NRDE2Q9H7Z3 1164 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 IFT122Q9HBG6 1241 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 ENTPD7Q9NQZ7 604 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 SPG21Q9NZD8 308 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 PUF60Q9UHX1 559 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 INPP5FQ9Y2H2 1132 aa5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 MTCL1Q9Y4B5 1905 aaKnown RBP5.25□□□□□ -1.57
GTF3C3-208ENST00000455546 C2orf16Q68DN1 1984 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CCDC194A0A1B0GVG4 234 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 C2orf71A6NGG8 1288 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 LOC730098B7Z3J9 87 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 C2CD2LO14523 706 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 MARCH6O60337 910 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 B4GALT3O60512 393 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 PFKFB2O60825 505 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CLASP2O75122 1294 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ZC3H11AO75152 810 aaKnown RBP eCLIP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 OFD1O75665 1012 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DDHD2O94830 711 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 LARGE1O95461 756 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 SSBP05455 408 aaKnown RBP eCLIP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 MYBP10242 640 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 BMP4P12644 408 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 FDPSP14324 419 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 HOXA11P31270 313 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 QARSP47897 775 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ALDH7A1P49419 539 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 AK2P54819 239 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DAB2P98082 770 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ZXDAP98168 799 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CYP4A11Q02928 519 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ME3Q16798 604 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 XKR9Q5GH70 373 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 HERC4Q5GLZ8 1057 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 FOXR1Q6PIV2 292 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CPLX2Q6PUV4 134 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 TMEM184AQ6ZMB5 413 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 CATSPER4Q7RTX7 472 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 NEK8Q86SG6 692 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 ZNF280BQ86YH2 543 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 VPS52Q8N1B4 723 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 SLC39A11Q8N1S5 342 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 LRRC43Q8N309 656 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 MRPL43Q8N983 215 aaKnown RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 DAGLBQ8NCG7 672 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 RDM1Q8NG50 284 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 OR13H1Q8NG92 308 aa5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 BCL7CQ8WUZ0 217 aaPredicted RBP5.24□□□□□ -1.57
GTF3C3-208ENST00000455546 PRPF31Q8WWY3 499 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms